Non-Coding RNA Search

Ss1.1-rtra31_c17.5

Sequence:


               
               ATTTTGTCCCTGAGAGTACTCTGTTGTCACCTAGGTTCTTGATTCCCATATATGGCAATC
AGACTGGGCAGAGGCATTCCTCCTCGGGCATTACAGGAAAATTCTGAACTGCTTAAGACT
TGTTTTGGTTGGATCAAGTCCTTATTACAGTTGAAAAATATAGCATTAGAGACTAATTAA
TTATTTTGTCTCACCTGAAATTTTAATTAGTGGAATACTTATTTCTCAGTGCTGAAACTT
ACCTTTTTCAATTGTGATTGAATTACAAAAATAGTCTCTTTTTTGTGAAAAAGGAAAAAA
AAATAAGATGGCAAATACTCTAAAGTATAACTCTGCCTTTTCAAGTTTTGCTGAAGAATG
TGTCTGGTTAGGATAGCACAAACATTAACTTTTTTTTTATGGTTGTGCTTTTAAAATCTT
TGTTTATTAAGTTTCGACTTCTTGTTTCCACTCTGGATCATGAGATAGTTAACATTTTCC
ACCTTTTATTTCTTTTTCACATCTTTTGCTGTTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTGTCCCTGAGAGTACTCTGTTGTCACCTAGGTTCTTGATTCCCATATATGGCAATC
AGACTGGGCAGAGGCATTCCTCCTCGGGCATTACAGGAAAATTCTGAACTGCTTAAGACT
TGTTTTGGTTGGATCAAGTCCTTATTACAGTTGAAAAATATAGCATTAGAGACTAATTAA
TTATTTTGTCTCACCTGAAATTTTAATTAGTGGAATACTTATTTCTCAGTGCTGAAACTT
ACCTTTTTCAATTGTGATTGAATTACAAAAATAGTCTCTTTTTTGTGAAAAAGGAAAAAA
AAATAAGATGGCAAATACTCTAAAGTATAACTCTGCCTTTTCAAGTTTTGCTGAAGAATG
TGTCTGGTTAGGATAGCACAAACATTAACTTTTTTTTTATGGTTGTGCTTTTAAAATCTT
TGTTTATTAAGTTTCGACTTCTTGTTTCCACTCTGGATCATGAGATAGTTAACATTTTCC
ACCTTTTATTTCTTTTTCACATCTTTTGCTGTTTTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-516, gnl|bosTau2|chr9 (48817895-48817381)
               

               
               2-516, gnl|Hg17|chr6 (146161619-146161119)
               

               
               2-516, gnl|Mm7|chr10 (10994963-10995437)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-516, gnl|bosTau2|chr9 (48817895-48817381)
               

               
               2-516, gnl|Hg17|chr6 (146161619-146161119)
               

               
               2-516, gnl|Mm7|chr10 (10994963-10995437)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               fat (0.147427)
               

               
               bla (0.124347)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               bla (0.124347)
               

               
               tra (0.123092)

	2-516, gnl\|bosTau2\|chr9 (48817895-48817381)
	2-516, gnl\|Hg17\|chr6 (146161619-146161119)
	2-516, gnl\|Mm7\|chr10 (10994963-10995437)