Non-Coding RNA Search

Ss1.1-rtra32_h9.5

Sequence:


               
               GGTGAGTCCTTTTTTGGTGATGCATAGGCTTTGAAGGCGAGCAGACTCAGGCTGGCTGGC
CCCACGGACCTCTGAATTACCTTGAACATGTTGCTGGCAGTGGCAGCTCCGGCGGGGTCA
CCCTACCTCGGCCCTGCTGATTTTTCAAATTGGTCTTTAGATTGATGCTTCCTATAGTTC
AATTTCTATCATTAAATGTCTAATGTATAGTATGTTTTATAATTATAAACCTATTTTGTT
TCTTTTGAATTCTTAATGAGAAAATCGTAACAGTAATGAACCTTTATGATTGTTTACCTG
TTTTGTAATTCATGTATAGATTCTGCTTTCTTGAAAAAAATTTCCCTCTACTTGTTTTGT
TCCCTTACAGAATTAATATTTCATTTGTATTTCAGTTTTGATTTTATTTTGGGGGAACAT
GTTTAGAGAGAGGCTATATGAATGTTGTGTATCTGAAGGAAAATAGATAGATTTTGCTTA
TTGTGCTTCTTCTTTCCCAAGAGATAGTGTTCCTTCTGAGAATTACTTTATAATTTGAAG
AAAATTTTAAAAATAGCTGTTAGGACTTCTACCAAATATCTCTTCCAGCCTCTGCTACCT
CGTTTTGTACATATGTCATAAAATTAAGCACACCACACACATAATGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGAGTCCTTTTTTGGTGATGCATAGGCTTTGAAGGCGAGCAGACTCAGGCTGGCTGGC
CCCACGGACCTCTGAATTACCTTGAACATGTTGCTGGCAGTGGCAGCTCCGGCGGGGTCA
CCCTACCTCGGCCCTGCTGATTTTTCAAATTGGTCTTTAGATTGATGCTTCCTATAGTTC
AATTTCTATCATTAAATGTCTAATGTATAGTATGTTTTATAATTATAAACCTATTTTGTT
TCTTTTGAATTCTTAATGAGAAAATCGTAACAGTAATGAACCTTTATGATTGTTTACCTG
TTTTGTAATTCATGTATAGATTCTGCTTTCTTGAAAAAAATTTCCCTCTACTTGTTTTGT
TCCCTTACAGAATTAATATTTCATTTGTATTTCAGTTTTGATTTTATTTTGGGGGAACAT
GTTTAGAGAGAGGCTATATGAATGTTGTGTATCTGAAGGAAAATAGATAGATTTTGCTTA
TTGTGCTTCTTCTTTCCCAAGAGATAGTGTTCCTTCTGAGAATTACTTTATAATTTGAAG
AAAATTTTAAAAATAGCTGTTAGGACTTCTACCAAATATCTCTTCCAGCCTCTGCTACCT
CGTTTTGTACATATGTCATAAAATTAAGCACACCACACACATAATGAT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               135-641, gnl|bosTau2|chr14 (38102037-38101511)
               

               
               135-641, gnl|Hg17|chr8 (101382218-101381366)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               135-641, gnl|bosTau2|chr14 (38102037-38101511)
               

               
               135-641, gnl|Hg17|chr8 (101382218-101381366)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lyg (0.133103)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.133103)
               

               
               tra (0.123092)

	135-641, gnl\|bosTau2\|chr14 (38102037-38101511)
	135-641, gnl\|Hg17\|chr8 (101382218-101381366)