Ss1.1-rtra33_f4.5
|
TGCTTTACATACATTTCACATAAATTTTTAATTTATCTCATACAGGCGACTAACATTTTA
AAAAATATACTTTTAAGTTTATAATCTTAAAATTGGGACTTTTGTGTATCTTTGAAGGTG
AGTAATTTTCTTTATGCTTTTGGCGCTATGGGAATAGCGTGCTTTTTAAGCCATTGTCCT
TTTTTTAGTATGGTCACTAAATATTTTTACTAAGACCCTGACTTTGTAGCAGTTTCTTTT
ACAGCCCAGATATCTGCCCAACCAAGTATAATTCAGTTTCAGAGGAGGTTATCTATAGCT
GTTACTTAGATGTCAGCCCACGAGTGACATCTTTAACAATGACTGACAACGTTTAAGGAA
AAGAAACCGTAGCTACTAGTCTCCTACGAACACTTACCGTGTATTTTCATTGTGATTCAC
ATAGAAATGTTAAGAGATTTCCTTGCTTTGGTAACTCCTGACAATGTAACTGGTGCTGAG
TGTAGCTTCACGCTTAAGGTCTGCTGACATTCACTAACTTTCTGACTCTTAAGTGAGCCT
CTGTAGGATTTTGTTTCCATTTCTGCCCAGAAGGTATAAATACTAGGCATCTGTCATAGG
GTAATTATACAGGCCACATGAAACAGTAGAGGTAAATTTAGGTTATATGACATTTACTTG
ATGATGTATTTCAGGAAAGCCAGAATGAAAACACCATGATTAGGTGAACGATTGTGAGTG
TAAATGAAGAGATCTGTAACTCTTGGTACAAAGTTTCCCTAGGGTAGACTCTTAAGGAAT
TGGAAGAAAGGTAAGATGTTGAATTTTAGATGAATAATATTCAACAGAGACCATTCTGAC
TTTGAATTCAGACCCGTCCTGGACATCCATCATTTAGTAACCAAGTCTGCTTGTCTTCTG
CTCAAAAAGTATTTATTAGATACATTTTGCCTTTTCAAGTAAAGTTGATTTTTACAAAGC
ATTAGTCTTCAGGTCTGTTTTTCATTTCTCTCTAGCCCCACAATGCGTAAAAAAAACAAG
AGTGTCATTTTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCTTTACATACATTTCACATAAATTTTTAATTTATCTCATACAGGCGACTAACATTTTA
AAAAATATACTTTTAAGTTTATAATCTTAAAATTGGGACTTTTGTGTATCTTTGAAGGTG
AGTAATTTTCTTTATGCTTTTGGCGCTATGGGAATAGCGTGCTTTTTAAGCCATTGTCCT
TTTTTTAGTATGGTCACTAAATATTTTTACTAAGACCCTGACTTTGTAGCAGTTTCTTTT
ACAGCCCAGATATCTGCCCAACCAAGTATAATTCAGTTTCAGAGGAGGTTATCTATAGCT
GTTACTTAGATGTCAGCCCACGAGTGACATCTTTAACAATGACTGACAACGTTTAAGGAA
AAGAAACCGTAGCTACTAGTCTCCTACGAACACTTACCGTGTATTTTCATTGTGATTCAC
ATAGAAATGTTAAGAGATTTCCTTGCTTTGGTAACTCCTGACAATGTAACTGGTGCTGAG
TGTAGCTTCACGCTTAAGGTCTGCTGACATTCACTAACTTTCTGACTCTTAAGTGAGCCT
CTGTAGGATTTTGTTTCCATTTCTGCCCAGAAGGTATAAATACTAGGCATCTGTCATAGG
GTAATTATACAGGCCACATGAAACAGTAGAGGTAAATTTAGGTTATATGACATTTACTTG
ATGATGTATTTCAGGAAAGCCAGAATGAAAACACCATGATTAGGTGAACGATTGTGAGTG
TAAATGAAGAGATCTGTAACTCTTGGTACAAAGTTTCCCTAGGGTAGACTCTTAAGGAAT
TGGAAGAAAGGTAAGATGTTGAATTTTAGATGAATAATATTCAACAGAGACCATTCTGAC
TTTGAATTCAGACCCGTCCTGGACATCCATCATTTAGTAACCAAGTCTGCTTGTCTTCTG
CTCAAAAAGTATTTATTAGATACATTTTGCCTTTTCAAGTAAAGTTGATTTTTACAAAGC
ATTAGTCTTCAGGTCTGTTTTTCATTTCTCTCTAGCCCCACAATGCGTAAAAAAAACAAG
AGTGTCATTTTT
|
|
1-631, gnl|bosTau2|chr24 (32177208-32177836) |
|
1-631, gnl|Hg17|chr18 (42644113-42643205) |
| |
|
675-1015, gnl|bosTau2|chr24 (32177841-32178202) |
|
675-1015, gnl|canFam2|chr7 (47520316-47519767) |
|
675-1015, gnl|hg17|chr18 (42642561-42643180) |
|
675-1015, gnl|Hg17|chr18 (42643161-42642776) |
|
675-1015, gnl|loxAfr1|scaffold_117460 (1126-1714) |
|
675-1015, gnl|mm7|chr18 (77437612-77437082) |
|
675-1015, gnl|Mm7|chr18 (77437094-77437461) |
|
675-1015, gnl|oryCun1|scaffold_194557 (49795-49227) |
|
675-1015, gnl|panTro1|chr17 (38982368-38982980) |
|
675-1015, gnl|rheMac2|chr18 (39889991-39890605) |
|
675-1015, gnl|rn3|chr18 (74205847-74205355) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-631, gnl|bosTau2|chr24 (32177208-32177836) |
|
1-631, gnl|Hg17|chr18 (42644113-42643205) |
| |
|
675-1015, gnl|bosTau2|chr24 (32177841-32178202) |
|
675-1015, gnl|canFam2|chr7 (47520316-47519767) |
|
675-1015, gnl|hg17|chr18 (42642561-42643180) |
|
675-1015, gnl|Hg17|chr18 (42643161-42642776) |
|
675-1015, gnl|loxAfr1|scaffold_117460 (1126-1714) |
|
675-1015, gnl|mm7|chr18 (77437612-77437082) |
|
675-1015, gnl|Mm7|chr18 (77437094-77437461) |
|
675-1015, gnl|oryCun1|scaffold_194557 (49795-49227) |
|
675-1015, gnl|panTro1|chr17 (38982368-38982980) |
|
675-1015, gnl|rheMac2|chr18 (39889991-39890605) |
|
675-1015, gnl|rn3|chr18 (74205847-74205355) |
|
kid (0.389206) |
|
liv (0.292569) |
|
tra (0.246184) |
|
aor (0.195274) |
|
rec (0.17307) |
|
bfe (0.149858) |
|
lin (0.145603) |
|
med (0.116252) |
|
cbl (0.114797) |
|
kid (0.389206) |
|
liv (0.292569) |
|
tra (0.246184) |
|
aor (0.195274) |
|
rec (0.17307) |
|
bfe (0.149858) |
|
lin (0.145603) |
|
med (0.116252) |
|
cbl (0.114797) |
