Non-Coding RNA Search

Ss1.1-ruio03_o24.5

Sequence:


               
               AGGATCACACTATATATTAAATGTAAAAGCCTAAAGATAATTTAAAGGGTCAGTGGATCA
TTCCATCTTGGCAAAATCAGAGTGACAGTAAATTATAAAGTTTAGTGATTTCATGTTGGG
GCAGGAAAGGTTAAGTAAGTACATATTGATTTCACTAAAAGCATACCTAAATGAATGTCA
TCAAAAATGTCCACAATTTTTAGGAAAAAAAATTTAAAAAGAGGTAGCACAGTATTGTTT
TATAATGTTCAGAGTGTTTTTCTGCTAATTCATACTATCAGAATTTTACTAGTTGCAGGA
ATCAGTTGATTGTCCTATATGACCTAACAAAAAAACACTCCAAGTATTTGATAGAGCACA
TAAAACCAGGTTTCATGATGATAATGACTACCTGTCTTTTAAATTCAGATTTTTGTCATC
TGGGTAAATGATTTTTGTGTTGTCTTAAAACATAAGGCTTTTGCTCTCTTATATTCTCCA
ATATCAGTATACTTATATTTTCAAGTGGAAAGTTGATAGATGATACAAAGCAGATTTTTG
TCCCAGAGTTCAATTATTTGGTTTCAAGTATCTTAAACTTCAGAAGAGTTTTTGTTACTG
TAAGAAGATTCAAAAATAAATCACTAACCAGTTTTTAGTATTTTAAAAAACATGGTAATT
GGATCTGAGCATTAAATTTGCCAACTGGTTATTTTCATAATTGTTTGAGTATTAATTTTT
CACTTCCTTGAGCTTGTTACGCTATATACCAGATTGAAGCTTGAAAAAAAAAAAAATCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGATCACACTATATATTAAATGTAAAAGCCTAAAGATAATTTAAAGGGTCAGTGGATCA
TTCCATCTTGGCAAAATCAGAGTGACAGTAAATTATAAAGTTTAGTGATTTCATGTTGGG
GCAGGAAAGGTTAAGTAAGTACATATTGATTTCACTAAAAGCATACCTAAATGAATGTCA
TCAAAAATGTCCACAATTTTTAGGAAAAAAAATTTAAAAAGAGGTAGCACAGTATTGTTT
TATAATGTTCAGAGTGTTTTTCTGCTAATTCATACTATCAGAATTTTACTAGTTGCAGGA
ATCAGTTGATTGTCCTATATGACCTAACAAAAAAACACTCCAAGTATTTGATAGAGCACA
TAAAACCAGGTTTCATGATGATAATGACTACCTGTCTTTTAAATTCAGATTTTTGTCATC
TGGGTAAATGATTTTTGTGTTGTCTTAAAACATAAGGCTTTTGCTCTCTTATATTCTCCA
ATATCAGTATACTTATATTTTCAAGTGGAAAGTTGATAGATGATACAAAGCAGATTTTTG
TCCCAGAGTTCAATTATTTGGTTTCAAGTATCTTAAACTTCAGAAGAGTTTTTGTTACTG
TAAGAAGATTCAAAAATAAATCACTAACCAGTTTTTAGTATTTTAAAAAACATGGTAATT
GGATCTGAGCATTAAATTTGCCAACTGGTTATTTTCATAATTGTTTGAGTATTAATTTTT
CACTTCCTTGAGCTTGTTACGCTATATACCAGATTGAAGCTTGAAAAAAAAAAAAATCCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               73-768, gnl|bosTau2|chr4 (3932779-3932082)
               

               
               73-768, gnl|Hg17|chr7 (7059821-7060499)
               

               
               73-768, gnl|Mm7|chr6 (7831878-7832581)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               73-768, gnl|bosTau2|chr4 (3932779-3932082)
               

               
               73-768, gnl|Hg17|chr7 (7059821-7060499)
               

               
               73-768, gnl|Mm7|chr6 (7831878-7832581)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               kid (0.129735)
               

               
               ret (0.128733)
               

               
               cbl (0.114797)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)
               

               
               ret (0.128733)
               

               
               cbl (0.114797)

	73-768, gnl\|bosTau2\|chr4 (3932779-3932082)
	73-768, gnl\|Hg17\|chr7 (7059821-7060499)
	73-768, gnl\|Mm7\|chr6 (7831878-7832581)