Non-Coding RNA Search

Ss1.1-ruio04_h7.5

Sequence:


               
               TTCGGTATCAGCCCTTCTTGAACCCATAGGAACTGAATATTTGTTTTACTGCTTCATAAT
GTTCAATTTACACTAATAAAACTTACTAACTCTTAAAATTACTCTTTCTCTACTAGCCTC
TCCCTTTCGAAAATTTCAACTTTTCAGTTAATTGTTTTTGTATATACTCTAGAGTGTTGT
GAGAAAGGCTACTATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGATGGGTAGGT
AAAGTTTTCAGTATGCTCTACTACCTCAGTTTACTTGAAAATACTACATTATAGCTTAGC
CTTTACTTATCTGGTCTCTGATGCTTTTAATACTAGAAGTGAATCTGGCTTCTGCTTTCA
TGAACTATTTTTATCATAATTAATTGATTAGCTTAAAAAGAGAAAACCACTTGCTGATTC
TGTACTAAGTACATTTAGTTTATAATGCATCCATCCTTGCTATTTCAGTTTTCAGTAATT
AAGGAAGATTTCTGTGGTTTGTTTAGTCTTTGACCTTCAGTTTATAGCATTGGGTCACGT
TTTGCCTTGTTCTTTTCATACTCAAGAAATCTCCAACCAGACTAAGAAGAAATGGTTATT
TTAATGGAATGTAAACCTGAAATTGGTGTACTTTGCAATCAGTTTGGCCTCTGTGTCCTA
GCAGCTGGTCCTAGTTAGTATCTGAGTCTCCCATGGATGACTTGCTGTCAAAGAGTGTTT
ATGGATATATTTTCTTTGGCTTAATTTTTTTATTCTATTCATTAACAAAATTCTTCTCTC
ATCTATTGTTTGGAATTCCATGAATCATTTTGCTTGGCAGAAATCAGAATATAGAAAAGA
TCATATTTGGGTCACTGTATTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCGGTATCAGCCCTTCTTGAACCCATAGGAACTGAATATTTGTTTTACTGCTTCATAAT
GTTCAATTTACACTAATAAAACTTACTAACTCTTAAAATTACTCTTTCTCTACTAGCCTC
TCCCTTTCGAAAATTTCAACTTTTCAGTTAATTGTTTTTGTATATACTCTAGAGTGTTGT
GAGAAAGGCTACTATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGATGGGTAGGT
AAAGTTTTCAGTATGCTCTACTACCTCAGTTTACTTGAAAATACTACATTATAGCTTAGC
CTTTACTTATCTGGTCTCTGATGCTTTTAATACTAGAAGTGAATCTGGCTTCTGCTTTCA
TGAACTATTTTTATCATAATTAATTGATTAGCTTAAAAAGAGAAAACCACTTGCTGATTC
TGTACTAAGTACATTTAGTTTATAATGCATCCATCCTTGCTATTTCAGTTTTCAGTAATT
AAGGAAGATTTCTGTGGTTTGTTTAGTCTTTGACCTTCAGTTTATAGCATTGGGTCACGT
TTTGCCTTGTTCTTTTCATACTCAAGAAATCTCCAACCAGACTAAGAAGAAATGGTTATT
TTAATGGAATGTAAACCTGAAATTGGTGTACTTTGCAATCAGTTTGGCCTCTGTGTCCTA
GCAGCTGGTCCTAGTTAGTATCTGAGTCTCCCATGGATGACTTGCTGTCAAAGAGTGTTT
ATGGATATATTTTCTTTGGCTTAATTTTTTTATTCTATTCATTAACAAAATTCTTCTCTC
ATCTATTGTTTGGAATTCCATGAATCATTTTGCTTGGCAGAAATCAGAATATAGAAAAGA
TCATATTTGGGTCACTGTATTTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-864, gnl|bosTau2|chr7 (18889412-18888541)
               

               
               1-864, gnl|Hg17|chr5 (131007342-131006464)
               

               
               1-864, gnl|Mm7|chr11 (54473236-54474197)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-864, gnl|bosTau2|chr7 (18889412-18888541)
               

               
               1-864, gnl|Hg17|chr5 (131007342-131006464)
               

               
               1-864, gnl|Mm7|chr11 (54473236-54474197)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

Help | Less info


               
               fty (0.17584)
               

               
               liv (0.146284)
               

               
               kid (0.129735)
               

               
               ova (0.129132)
               

               
               cbl (0.114797)
               

               
               cty (0.10408)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               liv (0.146284)
               

               
               kid (0.129735)
               

               
               ova (0.129132)
               

               
               cbl (0.114797)
               

               
               cty (0.10408)

	1-864, gnl\|bosTau2\|chr7 (18889412-18888541)
	1-864, gnl\|Hg17\|chr5 (131007342-131006464)
	1-864, gnl\|Mm7\|chr11 (54473236-54474197)

	fty (0.17584)
	liv (0.146284)
	kid (0.129735)
	ova (0.129132)
	cbl (0.114797)
	cty (0.10408)