Non-Coding RNA Search

Ss1.1-ruio05_f18.5

Sequence:


               
               CTCAATACTTAGCAACATGTGTTGTACAGTGCTTTCAGCATCAAGGATGATCTACACAGC
AAGCCAGGAAGGACAACTGCCTTCAATATTCTCTATGCTCAATAACCACTCCTGTCCAAG
CATGGCTGTCGGCCAGATAATCATTTTAACTTCTATTGTTATTATAACATCAGATTTAAT
CAACTTAATAAGATATTCAGTATTAGCAATATGGTTTTTAAGAGGGCTACATATGATAGG
TTTACTTAAACTAAGGTACCAGGAACCCAGTCTGCCTAGACCTTATAAGGTGCCTTTGCC
ATTTGTATTTGGAAGCATAGCTATATCTTTGTTTCTGATTTTGACACCATTGATTCAGGC
TCCTAAATTAGAGCATATCTATGGGCTTGTCTTTATATGCAGTGGACTTCTGTGTTACTG
GATTCATGTTCACCTTAATCAACATTCTGTCTGTTTTTTCAAAATCACTTGTTCTTTACA
ATTACTGTTTAATGTTTCACCACCTGAAGACCATGATGAACGTATTTCAACAAGCAAAAA
AGACCTTAAATCTTTTTGTAAATAAGAAACTTTAAAATGTAAAATGTGGAGTTCCCATTG
TGGCTCAGCAGACTAAGAACCTGACGTCCCCATGATGATGCAGGTTCGATCCTTGGCCTC
ACTCAGTGGGTTAATTATCCGGTGTTGTAGCAATCTATGGTATAAGTCACAGAGGCAGCT
CTGACCAGTGTTACTGTGACTGTGGTGCAGGCCTCAGCTGAAGCTCCAAGTCAATCCCTA
GCCTGGGAACTTCCATATGCCCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCAATACTTAGCAACATGTGTTGTACAGTGCTTTCAGCATCAAGGATGATCTACACAGC
AAGCCAGGAAGGACAACTGCCTTCAATATTCTCTATGCTCAATAACCACTCCTGTCCAAG
CATGGCTGTCGGCCAGATAATCATTTTAACTTCTATTGTTATTATAACATCAGATTTAAT
CAACTTAATAAGATATTCAGTATTAGCAATATGGTTTTTAAGAGGGCTACATATGATAGG
TTTACTTAAACTAAGGTACCAGGAACCCAGTCTGCCTAGACCTTATAAGGTGCCTTTGCC
ATTTGTATTTGGAAGCATAGCTATATCTTTGTTTCTGATTTTGACACCATTGATTCAGGC
TCCTAAATTAGAGCATATCTATGGGCTTGTCTTTATATGCAGTGGACTTCTGTGTTACTG
GATTCATGTTCACCTTAATCAACATTCTGTCTGTTTTTTCAAAATCACTTGTTCTTTACA
ATTACTGTTTAATGTTTCACCACCTGAAGACCATGATGAACGTATTTCAACAAGCAAAAA
AGACCTTAAATCTTTTTGTAAATAAGAAACTTTAAAATGTAAAATGTGGAGTTCCCATTG
TGGCTCAGCAGACTAAGAACCTGACGTCCCCATGATGATGCAGGTTCGATCCTTGGCCTC
ACTCAGTGGGTTAATTATCCGGTGTTGTAGCAATCTATGGTATAAGTCACAGAGGCAGCT
CTGACCAGTGTTACTGTGACTGTGGTGCAGGCCTCAGCTGAAGCTCCAAGTCAATCCCTA
GCCTGGGAACTTCCATATGCCCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-291, gnl|bosTau2|chr14 (47697151-47697440)
               

               
               2-291, gnl|Hg17|chr8 (87299102-87298813)
               

               
               2-291, gnl|Mm7|chr3 (14501766-14502055)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-291, gnl|bosTau2|chr14 (47697151-47697440)
               

               
               2-291, gnl|Hg17|chr8 (87299102-87298813)
               

               
               2-291, gnl|Mm7|chr3 (14501766-14502055)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               kid (0.129735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	2-291, gnl\|bosTau2\|chr14 (47697151-47697440)
	2-291, gnl\|Hg17\|chr8 (87299102-87298813)
	2-291, gnl\|Mm7\|chr3 (14501766-14502055)