Non-Coding RNA Search

Ss1.1-ruio08_g9.5

Sequence:


               
               GGCCTTCCAGCTGCACCAGCCCATTATTCCTATGTTTACACAAAATATTCGAGAAGGATT
TAGATCACTTGGAGGAACAAGGTTATTTCGGTGGCTTTATGAAAAGTTCCGCTATCCATT
TGCTCCAATGTATGGAGGTTTTCCAGTGAAGTTACGCACCTATCTAGGTGATCCCATTCC
GTACGATCCAAAGATAACAGCAGAAGAATTAGCTGAAAAGACGAAGGATGCTGTTCAAGC
TTTGATTGATAAGCACCAAAGAATACCTGGAAACATTATGAGTGCTTTGTTAGAACGTTT
CCATAAAAAACAAAAGATCAACTAAACGACCCTTTAATACCTTTATATTGATATGTTTGT
GTCCACAGGCCTATCTCCTAAATTTTGTAGGTTCTATGATTGTTTTTTTTTTTTTTTAAA
TCAGGTGAATGAGCATCTTTTGCTGAACTTACTTAAAATTCTATTGTCAGTTTTGTTTCT
GCAATCAATTGTGTCAGATTTAAACAGTAATTCATGCCTAATGATTCAGAAAATGATCAT
GTTTCTTGTGATAATTTCCTAATAATGTATCATAAATGTAGATTCTTAAAGTTTTTATGA
ACAAACATTCCTAAATAAGGCATCTATTTCCGTATCTCTGGCACTGAGCTAGTTTTGCAA
GATGGGGTAACCTAGGGTTTAGTACCGTCGCTTGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCTTCCAGCTGCACCAGCCCATTATTCCTATGTTTACACAAAATATTCGAGAAGGATT
TAGATCACTTGGAGGAACAAGGTTATTTCGGTGGCTTTATGAAAAGTTCCGCTATCCATT
TGCTCCAATGTATGGAGGTTTTCCAGTGAAGTTACGCACCTATCTAGGTGATCCCATTCC
GTACGATCCAAAGATAACAGCAGAAGAATTAGCTGAAAAGACGAAGGATGCTGTTCAAGC
TTTGATTGATAAGCACCAAAGAATACCTGGAAACATTATGAGTGCTTTGTTAGAACGTTT
CCATAAAAAACAAAAGATCAACTAAACGACCCTTTAATACCTTTATATTGATATGTTTGT
GTCCACAGGCCTATCTCCTAAATTTTGTAGGTTCTATGATTGTTTTTTTTTTTTTTTAAA
TCAGGTGAATGAGCATCTTTTGCTGAACTTACTTAAAATTCTATTGTCAGTTTTGTTTCT
GCAATCAATTGTGTCAGATTTAAACAGTAATTCATGCCTAATGATTCAGAAAATGATCAT
GTTTCTTGTGATAATTTCCTAATAATGTATCATAAATGTAGATTCTTAAAGTTTTTATGA
ACAAACATTCCTAAATAAGGCATCTATTTCCGTATCTCTGGCACTGAGCTAGTTTTGCAA
GATGGGGTAACCTAGGGTTTAGTACCGTCGCTTGAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61878729|ref|XP_609059.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61878729|ref|XP_609059.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               219-590, gnl|bosTau2|chr14 (11914507-11914886)
               

               
               219-590, gnl|Hg17|chr8 (56815333-56814986)
               

               
               219-590, gnl|Mm7|chr4 (3477728-3477367)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               219-590, gnl|bosTau2|chr14 (11914507-11914886)
               

               
               219-590, gnl|Hg17|chr8 (56815333-56814986)
               

               
               219-590, gnl|Mm7|chr4 (3477728-3477367)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               kid (0.259471)
               

               
               tra (0.123092)
               

               
               cbl (0.114797)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.259471)
               

               
               tra (0.123092)
               

               
               cbl (0.114797)

	219-590, gnl\|bosTau2\|chr14 (11914507-11914886)
	219-590, gnl\|Hg17\|chr8 (56815333-56814986)
	219-590, gnl\|Mm7\|chr4 (3477728-3477367)