Ss1.1-ruio08_h5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCTAAGTTACACGGAACAGTATGTAGAATATGACCCATTTCTTGTGCCCCCTGACCCTT CTAACCCGTGGCTGTCCGATGATACTACCTTCTGGGAACTTGAAGCAAGCAAAGAACCAA GTCAGCAGAGGGTAAAACGGTGGGGTTTCGGCATGGATGAAGCATTGAAAGATCCAGTTG GGAGAGAACAGTTCCTTAAATTTCTAGAATCAGAATTCAGCTCAGAAAATTTAAGATTCT GGCTAGCAGTGGAGGACCTGAAGAAAAGGCCTATTAGAGAAGTCCCCTCTCGAGTTCAGG AAATTTGGCAAGAATTTCTGGCTCCAGGAGCCCCCAGTGCCATTAACTTGGATTCTAAGA GCTATGACAAAACCACACAGAATGTGAAGGAGCCCGGACGATACACATTCGAGGATGCTC AGGAGCACATTTACAAACTGATGAAAAGTGATTCATATCCACGCTTTATAAGATCCAGTG CCTATCAGGAGCTTCTACAGGCAAAGAAAAAGGGGAAATCTCTCACGTCAAAGAGGTTAA CAAGCCTCGTTCAGTCTTATTAAAAGGATCGTCTTGTAGCATGAAAGTGAACTGGAGTCC TTGCGTATACTTTGTAGTTCTTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCTAAGTTACACGGAACAGTATGTAGAATATGACCCATTTCTTGTGCCCCCTGACCCTT CTAACCCGTGGCTGTCCGATGATACTACCTTCTGGGAACTTGAAGCAAGCAAAGAACCAA GTCAGCAGAGGGTAAAACGGTGGGGTTTCGGCATGGATGAAGCATTGAAAGATCCAGTTG GGAGAGAACAGTTCCTTAAATTTCTAGAATCAGAATTCAGCTCAGAAAATTTAAGATTCT GGCTAGCAGTGGAGGACCTGAAGAAAAGGCCTATTAGAGAAGTCCCCTCTCGAGTTCAGG AAATTTGGCAAGAATTTCTGGCTCCAGGAGCCCCCAGTGCCATTAACTTGGATTCTAAGA GCTATGACAAAACCACACAGAATGTGAAGGAGCCCGGACGATACACATTCGAGGATGCTC AGGAGCACATTTACAAACTGATGAAAAGTGATTCATATCCACGCTTTATAAGATCCAGTG CCTATCAGGAGCTTCTACAGGCAAAGAAAAAGGGGAAATCTCTCACGTCAAAGAGGTTAA CAAGCCTCGTTCAGTCTTATTAAAAGGATCGTCTTGTAGCATGAAAGTGAACTGGAGTCC TTGCGTATACTTTGTAGTTCTTTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
| 1-114, gnl|bosTau2|chr16 (20105194-20105081) | |
| 1-114, gnl|canFam2|chr7 (35294823-35294960) | |
| 1-114, gnl|danRer3|chr17 (20631513-20631636) | |
| 1-114, gnl|dasNov1|scaffold_8870 (17948-17811) | |
| 1-114, gnl|echTel1|scaffold_314280 (5897-5761) | |
| 1-114, gnl|fr1|chrUn (57190706-57190820) | |
| 1-114, gnl|galGal2|chr3 (32400904-32400771) | |
| 1-114, gnl|hg17|chr1 (237302936-237303073) | |
| 1-114, gnl|Hg17|chr1 (237303067-237302954) | |
| 1-114, gnl|loxAfr1|scaffold_769 (92393-92530) | |
| 1-114, gnl|mm7|chr1 (175052371-175052507) | |
| 1-114, gnl|Mm7|chr1 (175052502-175052389) | |
| 1-114, gnl|monDom2|scaffold_13 (43448216-43448089) | |
| 1-114, gnl|oryCun1|scaffold_213582 (36280-36143) | |
| 1-114, gnl|panTro1|chr1 (221300208-221300345) | |
| 1-114, gnl|rheMac2|chr1 (216220464-216220327) | |
| 1-114, gnl|rn3|chr13 (90949251-90949388) | |
| 1-114, gnl|tetNig1|chrUn_random (9844226-9844345) | |
| 1-114, gnl|xenTro1|scaffold_218 (1379626-1379475) | |
| 230-423, gnl|bosTau2|chr10 (50909097-50909290) | |
| 230-423, gnl|canFam2|chr8 (48966688-48966906) | |
| 230-423, gnl|danRer3|chr20 (37865453-37865668) | |
| 230-423, gnl|dasNov1|scaffold_8870 (27604-27813) | |
| 230-423, gnl|echTel1|scaffold_102673 (1295-1513) | |
| 230-423, gnl|fr1|chrUn (248197113-248197325) | |
| 230-423, gnl|galGal2|chr5 (23968520-23968316) | |
| 230-423, gnl|hg17|chr14 (72054790-72055008) | |
| 230-423, gnl|Hg17|chr14 (72054806-72054999) | |
| 230-423, gnl|loxAfr1|scaffold_4698 (100385-100603) | |
| 230-423, gnl|mm7|chr12 (81109851-81110069) | |
| 230-423, gnl|Mm7|chr12 (81109867-81110060) | |
| 230-423, gnl|monDom2|scaffold_8 (62963782-62963561) | |
| 230-423, gnl|oryCun1|scaffold_213582 (40022-40219) | |
| 230-423, gnl|panTro1|chr15 (71829291-71829509) | |
| 230-423, gnl|rheMac2|chr7 (135609097-135609315) | |
| 230-423, gnl|rn3|chr6 (106940114-106940332) | |
| 230-423, gnl|tetNig1|chr14 (4461913-4461699) | |
| 230-423, gnl|xenTro1|scaffold_218 (1383455-1383659) | |
| 511-624, gnl|bosTau2|chr16 (20081577-20081464) | |
| 511-624, gnl|canFam2|chr7 (35266397-35266939) | |
| 511-624, gnl|dasNov1|scaffold_50386 (1693-1137) | |
| 511-624, gnl|galGal2|chr3 (32430522-32430006) | |
| 511-624, gnl|hg17|chr1 (237265112-237265663) | |
| 511-624, gnl|Hg17|chr1 (237265556-237265443) | |
| 511-624, gnl|loxAfr1|scaffold_769 (66866-67436) | |
| 511-624, gnl|mm7|chr1 (175025623-175026219) | |
| 511-624, gnl|Mm7|chr1 (175026074-175025960) | |
| 511-624, gnl|monDom2|scaffold_13 (43478080-43477529) | |
| 511-624, gnl|oryCun1|scaffold_213582 (66470-65922) | |
| 511-624, gnl|panTro1|chr1 (221261232-221261782) | |
| 511-624, gnl|rheMac2|chr1 (216256327-216255776) | |
| 511-624, gnl|rn3|chr13 (90921574-90922128) |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-114, gnl|bosTau2|chr16 (20105194-20105081) | |
| 1-114, gnl|canFam2|chr7 (35294823-35294960) | |
| 1-114, gnl|danRer3|chr17 (20631513-20631636) | |
| 1-114, gnl|dasNov1|scaffold_8870 (17948-17811) | |
| 1-114, gnl|echTel1|scaffold_314280 (5897-5761) | |
| 1-114, gnl|fr1|chrUn (57190706-57190820) | |
| 1-114, gnl|galGal2|chr3 (32400904-32400771) | |
| 1-114, gnl|hg17|chr1 (237302936-237303073) | |
| 1-114, gnl|Hg17|chr1 (237303067-237302954) | |
| 1-114, gnl|loxAfr1|scaffold_769 (92393-92530) | |
| 1-114, gnl|mm7|chr1 (175052371-175052507) | |
| 1-114, gnl|Mm7|chr1 (175052502-175052389) | |
| 1-114, gnl|monDom2|scaffold_13 (43448216-43448089) | |
| 1-114, gnl|oryCun1|scaffold_213582 (36280-36143) | |
| 1-114, gnl|panTro1|chr1 (221300208-221300345) | |
| 1-114, gnl|rheMac2|chr1 (216220464-216220327) | |
| 1-114, gnl|rn3|chr13 (90949251-90949388) | |
| 1-114, gnl|tetNig1|chrUn_random (9844226-9844345) | |
| 1-114, gnl|xenTro1|scaffold_218 (1379626-1379475) | |
| 230-423, gnl|bosTau2|chr10 (50909097-50909290) | |
| 230-423, gnl|canFam2|chr8 (48966688-48966906) | |
| 230-423, gnl|danRer3|chr20 (37865453-37865668) | |
| 230-423, gnl|dasNov1|scaffold_8870 (27604-27813) | |
| 230-423, gnl|echTel1|scaffold_102673 (1295-1513) | |
| 230-423, gnl|fr1|chrUn (248197113-248197325) | |
| 230-423, gnl|galGal2|chr5 (23968520-23968316) | |
| 230-423, gnl|hg17|chr14 (72054790-72055008) | |
| 230-423, gnl|Hg17|chr14 (72054806-72054999) | |
| 230-423, gnl|loxAfr1|scaffold_4698 (100385-100603) | |
| 230-423, gnl|mm7|chr12 (81109851-81110069) | |
| 230-423, gnl|Mm7|chr12 (81109867-81110060) | |
| 230-423, gnl|monDom2|scaffold_8 (62963782-62963561) | |
| 230-423, gnl|oryCun1|scaffold_213582 (40022-40219) | |
| 230-423, gnl|panTro1|chr15 (71829291-71829509) | |
| 230-423, gnl|rheMac2|chr7 (135609097-135609315) | |
| 230-423, gnl|rn3|chr6 (106940114-106940332) | |
| 230-423, gnl|tetNig1|chr14 (4461913-4461699) | |
| 230-423, gnl|xenTro1|scaffold_218 (1383455-1383659) | |
| 511-624, gnl|bosTau2|chr16 (20081577-20081464) | |
| 511-624, gnl|canFam2|chr7 (35266397-35266939) | |
| 511-624, gnl|dasNov1|scaffold_50386 (1693-1137) | |
| 511-624, gnl|galGal2|chr3 (32430522-32430006) | |
| 511-624, gnl|hg17|chr1 (237265112-237265663) | |
| 511-624, gnl|Hg17|chr1 (237265556-237265443) | |
| 511-624, gnl|loxAfr1|scaffold_769 (66866-67436) | |
| 511-624, gnl|mm7|chr1 (175025623-175026219) | |
| 511-624, gnl|Mm7|chr1 (175026074-175025960) | |
| 511-624, gnl|monDom2|scaffold_13 (43478080-43477529) | |
| 511-624, gnl|oryCun1|scaffold_213582 (66470-65922) | |
| 511-624, gnl|panTro1|chr1 (221261232-221261782) | |
| 511-624, gnl|rheMac2|chr1 (216256327-216255776) | |
| 511-624, gnl|rn3|chr13 (90921574-90922128) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sin (0.174948) | |
| kid (0.129735) | |
| jej (0.0989218) |