Non-Coding RNA Search

Ss1.1-ruio08_n11.5

Sequence:


               
               CTTCCTTTTCCTCTTCCTCTTTCTCTTTCTCTCTCTCTCTTTTCTTTTCTTTCTTTTCTT
TCTTTCATGGGGGGAGGCATCCTTTGAAACCAGATTGAGACTGGTGTCTGTGCAGAATGT
TGCTCTCACAGTGCTGAACTTGCATACTGCAAGAGGCTGCTTCTAAGTACAGATGAACCT
TGTCCTTGTGCAATGTCCTAAAGGAGAACCATAGTTTACATGCAATCTTGCAGTCTTTCT
GCTATGAAGAATGTTTATTTGCCTTTTTCAATGTATTTGCTTGATTTAGCCAGTCTGAAC
AAGGAAAGGAAAAATTAAAAACCTCTGAACTCTGATCTTTTGCTGCTTTTGTATGTTCTG
ATTGTGAAGTTGATGGTAAGGATGTTCAAAAGCACATGGTAAATTTATATGTCTTCAGAA
TACTGTGCCTGTTCTATTATGAGCTTTTAAAATACTTTGTTAAAACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCCTTTTCCTCTTCCTCTTTCTCTTTCTCTCTCTCTCTTTTCTTTTCTTTCTTTTCTT
TCTTTCATGGGGGGAGGCATCCTTTGAAACCAGATTGAGACTGGTGTCTGTGCAGAATGT
TGCTCTCACAGTGCTGAACTTGCATACTGCAAGAGGCTGCTTCTAAGTACAGATGAACCT
TGTCCTTGTGCAATGTCCTAAAGGAGAACCATAGTTTACATGCAATCTTGCAGTCTTTCT
GCTATGAAGAATGTTTATTTGCCTTTTTCAATGTATTTGCTTGATTTAGCCAGTCTGAAC
AAGGAAAGGAAAAATTAAAAACCTCTGAACTCTGATCTTTTGCTGCTTTTGTATGTTCTG
ATTGTGAAGTTGATGGTAAGGATGTTCAAAAGCACATGGTAAATTTATATGTCTTCAGAA
TACTGTGCCTGTTCTATTATGAGCTTTTAAAATACTTTGTTAAAACAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               72-467, gnl|bosTau2|chr10 (17129098-17129507)
               

               
               72-467, gnl|Hg17|chr1 (164953254-164953655)
               

               
               72-467, gnl|Mm7|chr1 (165146108-165145664)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               72-467, gnl|bosTau2|chr10 (17129098-17129507)
               

               
               72-467, gnl|Hg17|chr1 (164953254-164953655)
               

               
               72-467, gnl|Mm7|chr1 (165146108-165145664)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fli (0.202881)
               

               
               csp (0.161186)
               

               
               ski (0.146735)
               

               
               kid (0.129735)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)
               

               
               csp (0.161186)
               

               
               ski (0.146735)
               

               
               kid (0.129735)

	72-467, gnl\|bosTau2\|chr10 (17129098-17129507)
	72-467, gnl\|Hg17\|chr1 (164953254-164953655)
	72-467, gnl\|Mm7\|chr1 (165146108-165145664)