Non-Coding RNA Search

Ss1.1-ruio09_g7.5

Sequence:


               
               TTCTCAGATTATTTATAATACTGACGCCGTGATTCGATAAGAGCATCTTTTCTTTCCCTA
GTGTTGTCTCTCACTCCCTCTTCCCTGTATGTTTTTTGCCCTCTTTCCTGGCAAGCATAA
TAGTCCCAGGGAGTGGCCTCCTGGTTTTCAGACTTACTTGGATAGTGGAAACCCACAGCT
GCTGCATATGCTATGTTTCCAAGAGGGCTAAGCTCAGAACCTAACCATTGCAACCATTCC
AATATTGATGGAAAGTTGAATTTACTTTAGCATTGCTTATTTTTTTTCTGTTTGATGGTT
CTTGACTTTGTAAAAATTTAAACAAATGAATGTCTATACTTTTTATAAAGAAAAGTGAAA
ATACCATGACAGAAAAGATGATACTATCAGATGTTGTTTAGAAAGCATTTATCTTGCATT
TCTTTATTCTTTCTAATTATCTAAAATTCAATAAAAGTTTATTCATATAAAAAAAAAAAA
AAAAAAATCGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTCAGATTATTTATAATACTGACGCCGTGATTCGATAAGAGCATCTTTTCTTTCCCTA
GTGTTGTCTCTCACTCCCTCTTCCCTGTATGTTTTTTGCCCTCTTTCCTGGCAAGCATAA
TAGTCCCAGGGAGTGGCCTCCTGGTTTTCAGACTTACTTGGATAGTGGAAACCCACAGCT
GCTGCATATGCTATGTTTCCAAGAGGGCTAAGCTCAGAACCTAACCATTGCAACCATTCC
AATATTGATGGAAAGTTGAATTTACTTTAGCATTGCTTATTTTTTTTCTGTTTGATGGTT
CTTGACTTTGTAAAAATTTAAACAAATGAATGTCTATACTTTTTATAAAGAAAAGTGAAA
ATACCATGACAGAAAAGATGATACTATCAGATGTTGTTTAGAAAGCATTTATCTTGCATT
TCTTTATTCTTTCTAATTATCTAAAATTCAATAAAAGTTTATTCATATAAAAAAAAAAAA
AAAAAAATCGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-473, gnl|bosTau2|chr16 (27548042-27548509)
               

               
               1-473, gnl|Hg17|chr3 (120102644-120102164)
               

               
               1-473, gnl|Mm7|chr16 (38744236-38744721)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-473, gnl|bosTau2|chr16 (27548042-27548509)
               

               
               1-473, gnl|Hg17|chr3 (120102644-120102164)
               

               
               1-473, gnl|Mm7|chr16 (38744236-38744721)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fce (0.543183)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.543183)
               

               
               kid (0.129735)

	1-473, gnl\|bosTau2\|chr16 (27548042-27548509)
	1-473, gnl\|Hg17\|chr3 (120102644-120102164)
	1-473, gnl\|Mm7\|chr16 (38744236-38744721)