Non-Coding RNA Search

Ss1.1-ruio10_l18.5

Sequence:


               
               GCCTCCAGGGCACAATAAAGAAAATGAAGATGACGTAGAGGTCATGTCAACAGACTCCTC
AAGCAGTAGCAGTGACTCTGATTAAAGAAAATGTGACAAAAAAAGCATACAGAATTGAAT
ATTATAGAAATCGGCTTCTTAAACAGCAGCAAACCTTTAAAAGCCAGGTGATACTGGCTG
TAGTGAAAGTGTGCCATCGTTAAAAATTATTGTGGACTTTTTGAAGCCAAAAATCATGGT
TTCGTTTCTGAACCACTAGGGGAATAGAGAAAAACAAAATTTACCGTTGGAATAAAAAGA
TTAGTCAGTTCAGTGCCATCTTAGTTGGAGTTGTACATAGTAGTTCTGGAAATACGATTT
GAGGGACATGACCCATGTACATCACTAATAGACCTCTTGTTATTACTTTGAAAAGCGTAA
ACAAAAGGCAGTAGATCGCTGAAAGTGCAACATAGCTCAGAGTAACAGAAAACTCATTTG
AATGTGAAGGCTGTTAGCTTGTGTCACAGGAGAACTTGCCTCAATTTGTACTGTTTGTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTCCAGGGCACAATAAAGAAAATGAAGATGACGTAGAGGTCATGTCAACAGACTCCTC
AAGCAGTAGCAGTGACTCTGATTAAAGAAAATGTGACAAAAAAAGCATACAGAATTGAAT
ATTATAGAAATCGGCTTCTTAAACAGCAGCAAACCTTTAAAAGCCAGGTGATACTGGCTG
TAGTGAAAGTGTGCCATCGTTAAAAATTATTGTGGACTTTTTGAAGCCAAAAATCATGGT
TTCGTTTCTGAACCACTAGGGGAATAGAGAAAAACAAAATTTACCGTTGGAATAAAAAGA
TTAGTCAGTTCAGTGCCATCTTAGTTGGAGTTGTACATAGTAGTTCTGGAAATACGATTT
GAGGGACATGACCCATGTACATCACTAATAGACCTCTTGTTATTACTTTGAAAAGCGTAA
ACAAAAGGCAGTAGATCGCTGAAAGTGCAACATAGCTCAGAGTAACAGAAAACTCATTTG
AATGTGAAGGCTGTTAGCTTGTGTCACAGGAGAACTTGCCTCAATTTGTACTGTTTGTAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-540, gnl|bosTau2|chr12 (7965698-7965146)
               

               
               2-540, gnl|Hg17|chr13 (47549359-47548752)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-540, gnl|bosTau2|chr12 (7965698-7965146)
               

               
               2-540, gnl|Hg17|chr13 (47549359-47548752)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               mcp (0.170648)
               

               
               ski (0.146735)
               

               
               kid (0.129735)
               

               
               thg (0.126791)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               ski (0.146735)
               

               
               kid (0.129735)
               

               
               thg (0.126791)

	2-540, gnl\|bosTau2\|chr12 (7965698-7965146)
	2-540, gnl\|Hg17\|chr13 (47549359-47548752)