Ss1.1-ruio13_f22.5
|
GAAGAACAAGTAGCATTTCTAAAACGTTGAAAAGTGTTATAGTAAATGTTACTTACTATT
AGATCAAGTGATGGATAATGTGAGAATAGTTTTCTTATAATTTCTAGGAACCACAGACAG
TTCCCTTTATATCCTCCCCTTGCTTTTGCACGTTCCTCTCCTGGTAACGTCTCTAGTGGG
TTTGGGAGAGTATTGTTCCCTCATTTCTTCTCAGCTTCTTTCTGCTTCAAGGTACTTTTG
TCCTGGAATCGTTGCATGCTTTCTGCTCTTCCTTTCTGGAAGTGGCTTTAATGAGGTAGA
AGGAACAGCACTGGGTCTCTTGGAGGATGAGCGGAAGGTCTGGTAGGGAGAGCACCTGCG
CTGCATTTACTCTTCATCTTCCAACTTGCTGTGCCCTGATCCTGAGTCTAGGACTATTGC
AAAATCCCAAACAATTTAAATTTAGCCTCTGCAGCCGTTTATATAAAGAGAAAATAAGAA
TTACATCCAGAAAATAGAGGTCATCAAAGATGAGTATACTTCCTTTGTTCTGCTTTTTTC
CAAATTCTTAGGTTCAAGAAGTAATTTTGGTGCTTGTATTGCTTTGGGAGATTCTAAACA
TTTCTTGAATGGAGAGCATGTAGGCGTCTCGGTATTTCACCTCTTTGCTTGGTATTCCTG
CTTGCGTTACATACAGTTGGACAGTGAACTGTGGTGTAAAGACAAAATTTTTATTCCTCA
ACAATCAAGACTTTTCTTATCTGTGGATAAGAAATTACAGCTGTATCACAGTTGATGAGT
GCAGCTGCCAGAAAGTGAGCAGAGGTGGGCGTTTGGCTGCTCCGTGTTCTGTAGGAAACG
TTCTGGTTACGGGATTTATGCTGTACATTAAAATGGAAATGCCTTTGAACTTAGTTTTCA
GTCTCCAATCTTAAGTTTTTGTTTTTAATCATTAAGGACTCTTTCAAAAACAATTACAAA
GAAAAATCTAAACTATCAAGACTCATTATTTTGTCAACTGTGTGTAAAGTATCTTGTGAG
TTTTATAGATCTTTTGACTGTCTCGTGTTTTCTCAGTACCAACGTCTTTATGGAAAAATT
CAGTTCTCTGTGAAGACTAGGAAATGTGTTGTATATTGAATTAGTTCCTTGTGTTGTTTT
GATATTTAAAATAAATATAAAGTTCTTTGGTCCTAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GAAGAACAAGTAGCATTTCTAAAACGTTGAAAAGTGTTATAGTAAATGTTACTTACTATT
AGATCAAGTGATGGATAATGTGAGAATAGTTTTCTTATAATTTCTAGGAACCACAGACAG
TTCCCTTTATATCCTCCCCTTGCTTTTGCACGTTCCTCTCCTGGTAACGTCTCTAGTGGG
TTTGGGAGAGTATTGTTCCCTCATTTCTTCTCAGCTTCTTTCTGCTTCAAGGTACTTTTG
TCCTGGAATCGTTGCATGCTTTCTGCTCTTCCTTTCTGGAAGTGGCTTTAATGAGGTAGA
AGGAACAGCACTGGGTCTCTTGGAGGATGAGCGGAAGGTCTGGTAGGGAGAGCACCTGCG
CTGCATTTACTCTTCATCTTCCAACTTGCTGTGCCCTGATCCTGAGTCTAGGACTATTGC
AAAATCCCAAACAATTTAAATTTAGCCTCTGCAGCCGTTTATATAAAGAGAAAATAAGAA
TTACATCCAGAAAATAGAGGTCATCAAAGATGAGTATACTTCCTTTGTTCTGCTTTTTTC
CAAATTCTTAGGTTCAAGAAGTAATTTTGGTGCTTGTATTGCTTTGGGAGATTCTAAACA
TTTCTTGAATGGAGAGCATGTAGGCGTCTCGGTATTTCACCTCTTTGCTTGGTATTCCTG
CTTGCGTTACATACAGTTGGACAGTGAACTGTGGTGTAAAGACAAAATTTTTATTCCTCA
ACAATCAAGACTTTTCTTATCTGTGGATAAGAAATTACAGCTGTATCACAGTTGATGAGT
GCAGCTGCCAGAAAGTGAGCAGAGGTGGGCGTTTGGCTGCTCCGTGTTCTGTAGGAAACG
TTCTGGTTACGGGATTTATGCTGTACATTAAAATGGAAATGCCTTTGAACTTAGTTTTCA
GTCTCCAATCTTAAGTTTTTGTTTTTAATCATTAAGGACTCTTTCAAAAACAATTACAAA
GAAAAATCTAAACTATCAAGACTCATTATTTTGTCAACTGTGTGTAAAGTATCTTGTGAG
TTTTATAGATCTTTTGACTGTCTCGTGTTTTCTCAGTACCAACGTCTTTATGGAAAAATT
CAGTTCTCTGTGAAGACTAGGAAATGTGTTGTATATTGAATTAGTTCCTTGTGTTGTTTT
GATATTTAAAATAAATATAAAGTTCTTTGGTCCTAA
|
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7-491, gnl|bosTau2|chr16 (53964247-53963767) |
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7-491, gnl|Hg17|chr1 (193855649-193855155) |
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7-491, gnl|Mm7|chr1 (139334937-139335388) |
| |
|
847-1176, gnl|bosTau2|chr16 (53963485-53963168) |
|
847-1176, gnl|canFam2|chr7 (8544937-8544573) |
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847-1176, gnl|echTel1|scaffold_318855 (8254-7897) |
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847-1176, gnl|galGal2|chr8 (2542396-2542015) |
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847-1176, gnl|hg17|chr1 (193854464-193854822) |
|
847-1176, gnl|Hg17|chr1 (193854789-193854469) |
|
847-1176, gnl|loxAfr1|scaffold_11694 (46499-46138) |
|
847-1176, gnl|mm7|chr1 (139336013-139335668) |
|
847-1176, gnl|Mm7|chr1 (139335699-139336006) |
|
847-1176, gnl|monDom2|scaffold_16 (56392442-56392829) |
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847-1176, gnl|panTro1|chr1 (176503258-176503616) |
|
847-1176, gnl|rheMac2|chr1 (173387700-173387343) |
|
847-1176, gnl|rn3|chr13 (52822164-52821824) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
7-491, gnl|bosTau2|chr16 (53964247-53963767) |
|
7-491, gnl|Hg17|chr1 (193855649-193855155) |
|
7-491, gnl|Mm7|chr1 (139334937-139335388) |
| |
|
847-1176, gnl|bosTau2|chr16 (53963485-53963168) |
|
847-1176, gnl|canFam2|chr7 (8544937-8544573) |
|
847-1176, gnl|echTel1|scaffold_318855 (8254-7897) |
|
847-1176, gnl|galGal2|chr8 (2542396-2542015) |
|
847-1176, gnl|hg17|chr1 (193854464-193854822) |
|
847-1176, gnl|Hg17|chr1 (193854789-193854469) |
|
847-1176, gnl|loxAfr1|scaffold_11694 (46499-46138) |
|
847-1176, gnl|mm7|chr1 (139336013-139335668) |
|
847-1176, gnl|Mm7|chr1 (139335699-139336006) |
|
847-1176, gnl|monDom2|scaffold_16 (56392442-56392829) |
|
847-1176, gnl|panTro1|chr1 (176503258-176503616) |
|
847-1176, gnl|rheMac2|chr1 (173387700-173387343) |
|
847-1176, gnl|rn3|chr13 (52822164-52821824) |
|
mgp (0.461361) |
|
liv (0.438853) |
|
mga (0.32041) |
|
cte (0.29274) |
|
kid (0.259471) |
|
nms (0.213858) |
|
fcc (0.197785) |
|
cmu (0.186393) |
|
lin (0.145603) |
|
spl (0.143184) |
|
thg (0.126791) |
|
eep (0.122564) |
|
clu (0.119646) |
|
cbl (0.114797) |
|
mgp (0.461361) |
|
liv (0.438853) |
|
mga (0.32041) |
|
cte (0.29274) |
|
kid (0.259471) |
|
nms (0.213858) |
|
fcc (0.197785) |
|
cmu (0.186393) |
|
lin (0.145603) |
|
spl (0.143184) |
|
thg (0.126791) |
|
eep (0.122564) |
|
clu (0.119646) |
|
cbl (0.114797) |
