Non-Coding RNA Search

Ss1.1-ruio13_o15.5

Sequence:


               
               GTTGTATGTTTTTTTATTGGTCAAGTACATAATTATTAGAAAATGTAGCACTTTCTAGAG
ACACTATTAAAACATGTTAATATAATTCTAGAATTTCTGTATGTGTGTATACATGTGTAC
ATAACATACATATATACATTTAACAAAAAGGGGTAACATTGTATAAACTACTTTGTAACT
TATCTTTCCAGGCTAGTAAATAAATAATGTGATTATCTTTCCATGCTAGTAAATAAATAA
ATTACTCAGTTACCTTCTGAATAAACAGATGGGGGCAGTGAGTAACAACTATCCAAATAT
CAAAACCTCATTGAATAATTAAATTTTACCATCTTCCTATTTTTGTCAGCTTCAGTATCA
GATACGGCACAGCAGCCATCTGAAGAGCAAAGCAAGTCTCTTGAAAAACCAAAACAAAAA
AAGAATCGCTGTTTCATGTGCAGGAAGAAAGTGGGACTTACTGGGTTTGAATGCCGGTGT
GGAAATGTTTACTGTGGTGTACACCGTTACTCAGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGTATGTTTTTTTATTGGTCAAGTACATAATTATTAGAAAATGTAGCACTTTCTAGAG
ACACTATTAAAACATGTTAATATAATTCTAGAATTTCTGTATGTGTGTATACATGTGTAC
ATAACATACATATATACATTTAACAAAAAGGGGTAACATTGTATAAACTACTTTGTAACT
TATCTTTCCAGGCTAGTAAATAAATAATGTGATTATCTTTCCATGCTAGTAAATAAATAA
ATTACTCAGTTACCTTCTGAATAAACAGATGGGGGCAGTGAGTAACAACTATCCAAATAT
CAAAACCTCATTGAATAATTAAATTTTACCATCTTCCTATTTTTGTCAGCTTCAGTATCA
GATACGGCACAGCAGCCATCTGAAGAGCAAAGCAAGTCTCTTGAAAAACCAAAACAAAAA
AAGAATCGCTGTTTCATGTGCAGGAAGAAAGTGGGACTTACTGGGTTTGAATGCCGGTGT
GGAAATGTTTACTGTGGTGTACACCGTTACTCAGAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|56966812|pdb|1WFL|A

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|56966812|pdb|1WFL|A

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               350-516, gnl|bosTau2|chr15 (23688644-23688483)
               

               
               350-516, gnl|Hg17|chr9 (35440093-35440258)
               

               
               350-516, gnl|Mm7|chr7 (80539543-80537496)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               350-516, gnl|bosTau2|chr15 (23688644-23688483)
               

               
               350-516, gnl|Hg17|chr9 (35440093-35440258)
               

               
               350-516, gnl|Mm7|chr7 (80539543-80537496)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               kid (0.129735)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)
               

               
               thg (0.126791)

	350-516, gnl\|bosTau2\|chr15 (23688644-23688483)
	350-516, gnl\|Hg17\|chr9 (35440093-35440258)
	350-516, gnl\|Mm7\|chr7 (80539543-80537496)