Non-Coding RNA Search

Ss1.1-ruio14_d10.5.5

Sequence:


               
               ATCCGGTGCTGCTGCAACTGCAGCTCGGATCTGATCCATGGCCCGGGAGATCCACAGACC
ATGGGGCAGCCAAAAAAGAAATAAAACAAAAAAACCCTTTAATATGAAAACAAATGAATT
AAAAAGTACAAAACCAGAACTTTGTATCCGGCTCAGCTCTTCATATGGAAAGTAAAATAT
ATAATAGCAGTAAAAACTAAATATTTTATAAAAACCATTGGTAGTTCAAGGACAGCACAG
TGGCGATAAAAGAATCAAGTCTTAAAATATACATAAGAAAACATCTGCTTCTCAAAAAAA
GTTCCGTGGGAAAACAATCAGGTGCACACAATTACACAAAATAGCAAGCATTTGTGGAAA
AATGAAAGTTACTGAAGTTACTTCTCTTAAAGCTTCAAACAGGTGTATGATTTGAGAAAA
AGTATATTTTTGTGTACTAAGGATGAATAAAAAATAAAGCAACTGGTTTACTCTTCCCAC
CTGAAAAGGGATGACTGCATTAATATATGTGCTTTACACATTCATATCTGTTTTTATAAA
GATATGCATATCGGTTTTTCAGTGAATTATGCCTCAAAGTTTGTCAGAAAAAGGAAAAGC
AAACAAAAATGTAAGACCAACAAAATCATACAACCACAAGGCAGGGAGGCTATGGAAATA
AGCAGTTCTGTTTTGAAGCAATGTTTTATCATAGTGGCGCACACTCATGGAAGTAAAATG
AACACTGTAGATCTGCAGTCAAATTTAGCCACTTCTGGCAACATCACCTGGTGGTGCAGG
CTACAGGAAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCCGGTGCTGCTGCAACTGCAGCTCGGATCTGATCCATGGCCCGGGAGATCCACAGACC
ATGGGGCAGCCAAAAAAGAAATAAAACAAAAAAACCCTTTAATATGAAAACAAATGAATT
AAAAAGTACAAAACCAGAACTTTGTATCCGGCTCAGCTCTTCATATGGAAAGTAAAATAT
ATAATAGCAGTAAAAACTAAATATTTTATAAAAACCATTGGTAGTTCAAGGACAGCACAG
TGGCGATAAAAGAATCAAGTCTTAAAATATACATAAGAAAACATCTGCTTCTCAAAAAAA
GTTCCGTGGGAAAACAATCAGGTGCACACAATTACACAAAATAGCAAGCATTTGTGGAAA
AATGAAAGTTACTGAAGTTACTTCTCTTAAAGCTTCAAACAGGTGTATGATTTGAGAAAA
AGTATATTTTTGTGTACTAAGGATGAATAAAAAATAAAGCAACTGGTTTACTCTTCCCAC
CTGAAAAGGGATGACTGCATTAATATATGTGCTTTACACATTCATATCTGTTTTTATAAA
GATATGCATATCGGTTTTTCAGTGAATTATGCCTCAAAGTTTGTCAGAAAAAGGAAAAGC
AAACAAAAATGTAAGACCAACAAAATCATACAACCACAAGGCAGGGAGGCTATGGAAATA
AGCAGTTCTGTTTTGAAGCAATGTTTTATCATAGTGGCGCACACTCATGGAAGTAAAATG
AACACTGTAGATCTGCAGTCAAATTTAGCCACTTCTGGCAACATCACCTGGTGGTGCAGG
CTACAGGAAATG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               67-540, gnl|bosTau2|chr1 (22644680-22645148)
               

               
               67-540, gnl|Hg17|chr3 (99998553-99999093)
               

               
               67-540, gnl|Mm7|chr16 (58404207-58403762)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-540, gnl|bosTau2|chr1 (22644680-22645148)
               

               
               67-540, gnl|Hg17|chr3 (99998553-99999093)
               

               
               67-540, gnl|Mm7|chr16 (58404207-58403762)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               kid (0.389206)
               

               
               cmu (0.372787)
               

               
               mgp (0.230681)
               

               
               fco (0.157208)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.389206)
               

               
               cmu (0.372787)
               

               
               mgp (0.230681)
               

               
               fco (0.157208)

	67-540, gnl\|bosTau2\|chr1 (22644680-22645148)
	67-540, gnl\|Hg17\|chr3 (99998553-99999093)
	67-540, gnl\|Mm7\|chr16 (58404207-58403762)