Non-Coding RNA Search

Ss1.1-ruio15_c18.5

Sequence:


               
               TGCTTCTAGAGCCAGTCTTCATTTCCTGCGTCACCTCAGACTCCATATACCTACGTCATC
TCATCTCCTAACCGTGGGAGGAGGCGTCTGAAATTTGAGGGATTCATGATTCCTTTAAAC
ATCTGAGAAAAGCTTTGAACCTTCACCTCAGGACATACATTCTAATACACCTACCAGCAT
TTGACACACACATCCAGACATTTCCTGGACCCACTCAAGTTTCCTTTTAATTCTGTCTCT
CTTATTCAAGAACTCACCTGTCACCAAGCTCTGTGGTTTCTTCCATCAGAGAGAGATCTG
GGCAGTAGTACAGCTCTGAAGGCTGTGCACTGCACAACCCGAGGAGGCGCATTTTCCAGA
AGAGGCATCATGCATGTTTGAGTGTAATATGAGAGTTTTCCAGAAAATGGGAGGGAAATG
CTTGAGAAGGGATGTCGTTTTCTAGTTTGCACAAAGATGCCATATAGGTTTCCTTAGGTT
AAGGATACTTGCATTTGCAATGGCTCTCGCTCCTATATGCCAGACTTGAAGTAGCACTGG
ACTTGGTCTCTGCTGATACCCTCTCCTTGTTCAGTTAATGAAAATGATAATAAAGATGAT
TATGACGATGAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTTCTAGAGCCAGTCTTCATTTCCTGCGTCACCTCAGACTCCATATACCTACGTCATC
TCATCTCCTAACCGTGGGAGGAGGCGTCTGAAATTTGAGGGATTCATGATTCCTTTAAAC
ATCTGAGAAAAGCTTTGAACCTTCACCTCAGGACATACATTCTAATACACCTACCAGCAT
TTGACACACACATCCAGACATTTCCTGGACCCACTCAAGTTTCCTTTTAATTCTGTCTCT
CTTATTCAAGAACTCACCTGTCACCAAGCTCTGTGGTTTCTTCCATCAGAGAGAGATCTG
GGCAGTAGTACAGCTCTGAAGGCTGTGCACTGCACAACCCGAGGAGGCGCATTTTCCAGA
AGAGGCATCATGCATGTTTGAGTGTAATATGAGAGTTTTCCAGAAAATGGGAGGGAAATG
CTTGAGAAGGGATGTCGTTTTCTAGTTTGCACAAAGATGCCATATAGGTTTCCTTAGGTT
AAGGATACTTGCATTTGCAATGGCTCTCGCTCCTATATGCCAGACTTGAAGTAGCACTGG
ACTTGGTCTCTGCTGATACCCTCTCCTTGTTCAGTTAATGAAAATGATAATAAAGATGAT
TATGACGATGAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               104-614, gnl|bosTau2|chr23 (24251088-24250576)
               

               
               104-614, gnl|Hg17|chr6 (26202788-26203282)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               104-614, gnl|bosTau2|chr23 (24251088-24250576)
               

               
               104-614, gnl|Hg17|chr6 (26202788-26203282)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               aor (0.390549)
               

               
               fat (0.294855)
               

               
               cte (0.29274)
               

               
               fbs (0.175346)
               

               
               lyg (0.133103)
               

               
               kid (0.129735)
               

               
               sug (0.127291)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.390549)
               

               
               fat (0.294855)
               

               
               cte (0.29274)
               

               
               fbs (0.175346)
               

               
               lyg (0.133103)
               

               
               kid (0.129735)
               

               
               sug (0.127291)

	104-614, gnl\|bosTau2\|chr23 (24251088-24250576)
	104-614, gnl\|Hg17\|chr6 (26202788-26203282)

	aor (0.390549)
	fat (0.294855)
	cte (0.29274)
	fbs (0.175346)
	lyg (0.133103)
	kid (0.129735)
	sug (0.127291)