Ss1.1-ruio15_i1.5
               |  | TGAGCTTTAATTTACATCGAGAGATTTTTGGATTTGTTTTTCACATCAAATCTTCCAAAA
GTACAAAATTGCACTTGCATTCTTTAAAATTTTTCATCATTTTAGCAGTCCGTTAAGTTT
GTTTAACTTCTTCATGTTATACTTTCCAAAAGAATTACAGTTGAATTCTTTAAAATGCAA
CCATTTTGGGATTCCACTGTTTGCTACAATTGTGAGAACCATGTTTTTATTTCTGTACCT
TTAAAAAATTGATCTTTTAAGAGAAGTATTGGGAGAGAGAATGTATATGAAAACTTCTCA
CCCGTGCCTGGCCTCTCCCTAAAAAAAAAAAAAAAAAAAAAAAAAGAATTTTTTAAAAGG
CCAACCCGGAAGAGTTTCACCTTTCCGGAAAAATTTTTTTTTTTAACAAATTCCCTTGAG
GGGGAAAGGAAAAAAAACAAATGGGTTTCCAAACTTAATTTTTTGGGCCCCAAAAAAATA
CTTTTTCATTACCCTTGCTTGTTCAAGGGAAAACCCTTTGAAAAAAACCCCCAGGGAAAA
TCTCTCCCGATGCACTCACCTTTAAAAGTTCTTGGCTAAATTTCTAAAGCTAAAGTTTAA
AAAGTTTTGTTTTTTCAGGAACCCAGCTTTCCCCAAAAAACTTGAACTTCCCCCTTATCA
ACACCCAAATTTTATGGGCTTAAGGCTTTTTCATGGGAAAGGGGCCCC | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | TGAGCTTTAATTTACATCGAGAGATTTTTGGATTTGTTTTTCACATCAAATCTTCCAAAA
GTACAAAATTGCACTTGCATTCTTTAAAATTTTTCATCATTTTAGCAGTCCGTTAAGTTT
GTTTAACTTCTTCATGTTATACTTTCCAAAAGAATTACAGTTGAATTCTTTAAAATGCAA
CCATTTTGGGATTCCACTGTTTGCTACAATTGTGAGAACCATGTTTTTATTTCTGTACCT
TTAAAAAATTGATCTTTTAAGAGAAGTATTGGGAGAGAGAATGTATATGAAAACTTCTCA
CCCGTGCCTGGCCTCTCCCTAAAAAAAAAAAAAAAAAAAAAAAAAGAATTTTTTAAAAGG
CCAACCCGGAAGAGTTTCACCTTTCCGGAAAAATTTTTTTTTTTAACAAATTCCCTTGAG
GGGGAAAGGAAAAAAAACAAATGGGTTTCCAAACTTAATTTTTTGGGCCCCAAAAAAATA
CTTTTTCATTACCCTTGCTTGTTCAAGGGAAAACCCTTTGAAAAAAACCCCCAGGGAAAA
TCTCTCCCGATGCACTCACCTTTAAAAGTTCTTGGCTAAATTTCTAAAGCTAAAGTTTAA
AAAGTTTTGTTTTTTCAGGAACCCAGCTTTCCCCAAAAAACTTGAACTTCCCCCTTATCA
ACACCCAAATTTTATGGGCTTAAGGCTTTTTCATGGGAAAGGGGCCCC | 
               |  | 3-187, gnl|bosTau2|chr9 (34654577-34654768) | 
               |  | 3-187, gnl|canFam2|chrX (20018740-20019164) | 
               |  | 3-187, gnl|dasNov1|scaffold_15723 (52596-52159) | 
               |  | 3-187, gnl|echTel1|scaffold_123177 (17-386) | 
               |  | 3-187, gnl|hg17|chrX (24325055-24325487) | 
               |  | 3-187, gnl|Hg17|chrX (24325344-24325731) | 
               |  | 3-187, gnl|loxAfr1|scaffold_19910 (13797-13356) | 
               |  | 3-187, gnl|mm7|chrX (89145121-89144684) | 
               |  | 3-187, gnl|Mm7|chrX (89144828-89144638) | 
               |  | 3-187, gnl|monDom2|scaffold_48 (7190055-7189594) | 
               |  | 3-187, gnl|oryCun1|scaffold_156172 (5699-6121) | 
               |  | 3-187, gnl|panTro1|chrX (25132391-25132823) | 
               |  | 3-187, gnl|rheMac2|chrX (22377370-22377798) | 
               |  | 3-187, gnl|rn3|chrX (81172006-81171579) | 
| 
 |  | 
               |  | 401-681, gnl|bosTau2|chr9 (34654766-34655055) | 
               |  | 401-681, gnl|Hg17|chrX (24325729-24325993) | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
               |  | 3-187, gnl|bosTau2|chr9 (34654577-34654768) | 
               |  | 3-187, gnl|canFam2|chrX (20018740-20019164) | 
               |  | 3-187, gnl|dasNov1|scaffold_15723 (52596-52159) | 
               |  | 3-187, gnl|echTel1|scaffold_123177 (17-386) | 
               |  | 3-187, gnl|hg17|chrX (24325055-24325487) | 
               |  | 3-187, gnl|Hg17|chrX (24325344-24325731) | 
               |  | 3-187, gnl|loxAfr1|scaffold_19910 (13797-13356) | 
               |  | 3-187, gnl|mm7|chrX (89145121-89144684) | 
               |  | 3-187, gnl|Mm7|chrX (89144828-89144638) | 
               |  | 3-187, gnl|monDom2|scaffold_48 (7190055-7189594) | 
               |  | 3-187, gnl|oryCun1|scaffold_156172 (5699-6121) | 
               |  | 3-187, gnl|panTro1|chrX (25132391-25132823) | 
               |  | 3-187, gnl|rheMac2|chrX (22377370-22377798) | 
               |  | 3-187, gnl|rn3|chrX (81172006-81171579) | 
| 
 |  | 
               |  | 401-681, gnl|bosTau2|chr9 (34654766-34655055) | 
               |  | 401-681, gnl|Hg17|chrX (24325729-24325993) |