Non-Coding RNA Search

Ss1.1-ruio16_h16.5

Sequence:


               
               TTTTTTAAAAGTATACAATATACTGAATCTCTAAATCTGATTAAAGGTGTATTCTATTTT
TATTTGGGGGGGCTTTTTCTTATTTTCCACATTTTCTGGTTTATATGATTTAGTTAATTT
TTTTGCCAAGTTTTGTCATGTAATTTTTTTAAACAGCAGCACCTCCTTTTAAAAACATGT
TCATGGTAATTTATTAGTGCTTTCTTGTTTATTTGCATTTGACCATCTGATTTGTTAAAT
AACTTGAAATCTGTACTCTGGTTTGTAAAAATAATAGAACTAGATCTTTGTCATCAGAAT
GTGTATTTTGAGTTTATGTTCAGAATTGACATTGTAGGTCTATTCAGAGTCAGCAATACT
CACCTTTTGTGCATTTGTAAGTCCAACTGCAGGACTTTCTAAGAAGAGTCCCCTGCTAGG
GTCAAGTATATGACTATAAAACGTTTCCCTCTTTGAGAAGCTATTAAGTTCAGTATCTAC
TATTATTTACCATTGCTGTAACTGACCTAAGTGGTGGAGCTACAAGCATGTCATAGCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTAAAAGTATACAATATACTGAATCTCTAAATCTGATTAAAGGTGTATTCTATTTT
TATTTGGGGGGGCTTTTTCTTATTTTCCACATTTTCTGGTTTATATGATTTAGTTAATTT
TTTTGCCAAGTTTTGTCATGTAATTTTTTTAAACAGCAGCACCTCCTTTTAAAAACATGT
TCATGGTAATTTATTAGTGCTTTCTTGTTTATTTGCATTTGACCATCTGATTTGTTAAAT
AACTTGAAATCTGTACTCTGGTTTGTAAAAATAATAGAACTAGATCTTTGTCATCAGAAT
GTGTATTTTGAGTTTATGTTCAGAATTGACATTGTAGGTCTATTCAGAGTCAGCAATACT
CACCTTTTGTGCATTTGTAAGTCCAACTGCAGGACTTTCTAAGAAGAGTCCCCTGCTAGG
GTCAAGTATATGACTATAAAACGTTTCCCTCTTTGAGAAGCTATTAAGTTCAGTATCTAC
TATTATTTACCATTGCTGTAACTGACCTAAGTGGTGGAGCTACAAGCATGTCATAGCATT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-529, gnl|bosTau2|chr14 (45722473-45723008)
               

               
               2-529, gnl|Hg17|chr8 (91704574-91704067)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-529, gnl|bosTau2|chr14 (45722473-45723008)
               

               
               2-529, gnl|Hg17|chr8 (91704574-91704067)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               kid (0.129735)

	2-529, gnl\|bosTau2\|chr14 (45722473-45723008)
	2-529, gnl\|Hg17\|chr8 (91704574-91704067)