Non-Coding RNA Search

Ss1.1-ruio17_h18.5

Sequence:


               
               GAACTTTCCAATGATTATACCAGAAGAAACTATGCAAATATCAAAGAGAAGCTGTTTTCT
CTTGGATGTACTGCAGAACAGGTACAGAAGTTTGTTTTAAGTTATCCAGATGTGGTCTTC
TTGGGAGAGAAAAAGTTTAATCATAAAGTAGACTGCCTCATAGAAGAAAAAATTAGCATT
TCACAAATAATGGAAAATCCTCGGATTTTGGATTCAAGCGTAAGCACTTTAAAAAAGCGA
ATCAAAGAGTTGGTAAAGTCTGGCTATAACTTCAGTACATCAAATGTCAGTCTTCTGTCT
TGGAGTCAAAAAAGATATAATGCTAAATTGAAAAAGTTAAGCACTGTATAGAACACTGTT
CTGGGAAATTAAGCAAAGGAGTGTCTTATAATGTAGTGATAGAATGTCATTTTGAATTTG
GAGCTGTCAAAAAGAGGTTTGCTTTCTTAACTATATGTACATATATAGTGTTCCTTTGGA
TATTTTATTTTAAAGATTCATAAAAACTCATGGTCAGTATAGTCTTTCCAGCTACCTTTT
CTGTAGTTTGAAGTAATACAACATTCAACTTTATAATAAAGGTCATCGCTGTTATATAAA
TGGTAGTTGCTGAGTGCTAAGACAGAATATGTATAGAAAGTACAAAATAAGCTTTTTTTT
GGTTTATGCTTAAATTTTAAAATGGACAGATTCACTTAGTTCTAGTTCCTCTCATGGTGT
TAAATGGAAGCCTATTTCTCCTGTTATCCCATGTATCTTATTATTATTTACCTTCAAAAG
AGAATGCCAGTAAAAATCTGACAACAGGAAGGAGGAATTTTTTGTCCCATATCCTACATA
CTCTATTTACGCCACTGGTATGCTCCACCACTCCACACCACCAACTTGGGCTCAGTTTTT
CTGGGTCTATCCTGATGTTTTTGAATATAAAGGCCACTATGGTAGGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACTTTCCAATGATTATACCAGAAGAAACTATGCAAATATCAAAGAGAAGCTGTTTTCT
CTTGGATGTACTGCAGAACAGGTACAGAAGTTTGTTTTAAGTTATCCAGATGTGGTCTTC
TTGGGAGAGAAAAAGTTTAATCATAAAGTAGACTGCCTCATAGAAGAAAAAATTAGCATT
TCACAAATAATGGAAAATCCTCGGATTTTGGATTCAAGCGTAAGCACTTTAAAAAAGCGA
ATCAAAGAGTTGGTAAAGTCTGGCTATAACTTCAGTACATCAAATGTCAGTCTTCTGTCT
TGGAGTCAAAAAAGATATAATGCTAAATTGAAAAAGTTAAGCACTGTATAGAACACTGTT
CTGGGAAATTAAGCAAAGGAGTGTCTTATAATGTAGTGATAGAATGTCATTTTGAATTTG
GAGCTGTCAAAAAGAGGTTTGCTTTCTTAACTATATGTACATATATAGTGTTCCTTTGGA
TATTTTATTTTAAAGATTCATAAAAACTCATGGTCAGTATAGTCTTTCCAGCTACCTTTT
CTGTAGTTTGAAGTAATACAACATTCAACTTTATAATAAAGGTCATCGCTGTTATATAAA
TGGTAGTTGCTGAGTGCTAAGACAGAATATGTATAGAAAGTACAAAATAAGCTTTTTTTT
GGTTTATGCTTAAATTTTAAAATGGACAGATTCACTTAGTTCTAGTTCCTCTCATGGTGT
TAAATGGAAGCCTATTTCTCCTGTTATCCCATGTATCTTATTATTATTTACCTTCAAAAG
AGAATGCCAGTAAAAATCTGACAACAGGAAGGAGGAATTTTTTGTCCCATATCCTACATA
CTCTATTTACGCCACTGGTATGCTCCACCACTCCACACCACCAACTTGGGCTCAGTTTTT
CTGGGTCTATCCTGATGTTTTTGAATATAAAGGCCACTATGGTAGGTA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-946, gnl|bosTau2|chr4 (1771752-1772716)
               

               
               1-946, gnl|Mm7|chr5 (4203165-4204390)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-946, gnl|bosTau2|chr4 (1771752-1772716)
               

               
               1-946, gnl|Mm7|chr5 (4203165-4204390)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               lun (0.150489)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)
               

               
               kid (0.129735)

	1-946, gnl\|bosTau2\|chr4 (1771752-1772716)
	1-946, gnl\|Mm7\|chr5 (4203165-4204390)