Non-Coding RNA Search

Ss1.1-ruio17_n20.5

Sequence:


               
               CTTTGATCCTCTCAACTCTCAATATCCACTCCTGTCCAGTTGTAGCTGTCATTCAGATAC
TCATCTTTGCCTCCATTTTAATTATTCCCTCAGACTTAATCACTTTAATAAACTATGTGG
GATTCACAGACTGGATTCTACTAGGGCTAATGATGACAGGCTTGATTAAACTGAGATTCC
AGGAGCCCAACCTCTCCAGACCTTACAAGGTACATTTGCCATTTGTATTTGGAACCCTGG
CCATGTCTTTGTTCTTGGTTTTGACACCCATCATCAAGTCTCCTAAGATGCATCATATCT
ATGTCATTGTTTTTGTCCTCAGTGGACTTTTGTTTTATTTTCCTTTTGTTCACTTTAATT
TGGGTTCTACATATTTTAACAAGATAACTTGCTTTTTGCAGTTACTATTAAATGTTTCAC
CTGCTGATGACGTTGAATATATTTCACCTGAAGGAGTTTTACAGAAAATTCCACCTGAAA
CTGCAACCAAGAAAGAATAAATTATGCACATTTGGAAAATGACTGATTTATTCAAAGCAT
CTTTCCATTACAACCAGAGTAATATCCTTATGTGTATGTATACACACACTGCATATGTAA
AACACAACCGGCACAAGATAACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTGATCCTCTCAACTCTCAATATCCACTCCTGTCCAGTTGTAGCTGTCATTCAGATAC
TCATCTTTGCCTCCATTTTAATTATTCCCTCAGACTTAATCACTTTAATAAACTATGTGG
GATTCACAGACTGGATTCTACTAGGGCTAATGATGACAGGCTTGATTAAACTGAGATTCC
AGGAGCCCAACCTCTCCAGACCTTACAAGGTACATTTGCCATTTGTATTTGGAACCCTGG
CCATGTCTTTGTTCTTGGTTTTGACACCCATCATCAAGTCTCCTAAGATGCATCATATCT
ATGTCATTGTTTTTGTCCTCAGTGGACTTTTGTTTTATTTTCCTTTTGTTCACTTTAATT
TGGGTTCTACATATTTTAACAAGATAACTTGCTTTTTGCAGTTACTATTAAATGTTTCAC
CTGCTGATGACGTTGAATATATTTCACCTGAAGGAGTTTTACAGAAAATTCCACCTGAAA
CTGCAACCAAGAAAGAATAAATTATGCACATTTGGAAAATGACTGATTTATTCAAAGCAT
CTTTCCATTACAACCAGAGTAATATCCTTATGTGTATGTATACACACACTGCATATGTAA
AACACAACCGGCACAAGATAACTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-212, gnl|bosTau2|chr14 (47679112-47679323)
               

               
               1-212, gnl|Hg17|chr8 (87299023-87298812)
               

               
               1-212, gnl|Mm7|chr3 (14375709-14375920)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-212, gnl|bosTau2|chr14 (47679112-47679323)
               

               
               1-212, gnl|Hg17|chr8 (87299023-87298812)
               

               
               1-212, gnl|Mm7|chr3 (14375709-14375920)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (0.415628)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.415628)
               

               
               kid (0.129735)

	1-212, gnl\|bosTau2\|chr14 (47679112-47679323)
	1-212, gnl\|Hg17\|chr8 (87299023-87298812)
	1-212, gnl\|Mm7\|chr3 (14375709-14375920)