Non-Coding RNA Search

Ss1.1-ruio18_f9.5

Sequence:


               
               TAAGATTTCTCTCCTAATGGGGTAACATTGAGAAGAAACCATGTTAGCACCGAGATGAAT
GCTTAGAAATTCAGGGATATTGGGTCTTTACCCTTATGAATTTGAGCTGCTTACTTAATT
GATGTAATTTGCCACACATTAGTAGCATATTCATAGGATTTTGTTCTGTTACCCATTACA
AATTTCACAAACAGCTAGTTGCATGGTTAATAGATTATTGTGCCTCTTCTGCAAAACTGA
GTATAATTCTGATACTTCTGTGAATGTAAGTGGTACTTTTATTTCTAATTCCAAATACTA
GCTTATGTATATAGCCAGTAAATCCAGTTGTGTAATTTTTAAACTGCCATCAGTTGAAAG
CATGCAAAACTATGATTTTTTTTTAGCTACAGCTTCTGATTTCCTTCAGTTCTCCTTTTA
ACTCATCTCAGATGTAGCTGAGTCTTGATGATTCCAAAATAATGGCAGATAGAATTTTGA
GATTAGTATTAATTTCCCCTTTGCTAATTACTTTCTGTCCCCCTTCACTAAATTTGTCCA
GAAGTGTCAAGAATTCTAGCATTCTTTGTATAAACAACATTAAAAGCAGACTCAGCCATT
AATATTCTATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAGATTTCTCTCCTAATGGGGTAACATTGAGAAGAAACCATGTTAGCACCGAGATGAAT
GCTTAGAAATTCAGGGATATTGGGTCTTTACCCTTATGAATTTGAGCTGCTTACTTAATT
GATGTAATTTGCCACACATTAGTAGCATATTCATAGGATTTTGTTCTGTTACCCATTACA
AATTTCACAAACAGCTAGTTGCATGGTTAATAGATTATTGTGCCTCTTCTGCAAAACTGA
GTATAATTCTGATACTTCTGTGAATGTAAGTGGTACTTTTATTTCTAATTCCAAATACTA
GCTTATGTATATAGCCAGTAAATCCAGTTGTGTAATTTTTAAACTGCCATCAGTTGAAAG
CATGCAAAACTATGATTTTTTTTTAGCTACAGCTTCTGATTTCCTTCAGTTCTCCTTTTA
ACTCATCTCAGATGTAGCTGAGTCTTGATGATTCCAAAATAATGGCAGATAGAATTTTGA
GATTAGTATTAATTTCCCCTTTGCTAATTACTTTCTGTCCCCCTTCACTAAATTTGTCCA
GAAGTGTCAAGAATTCTAGCATTCTTTGTATAAACAACATTAAAAGCAGACTCAGCCATT
AATATTCTATCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               311-609, gnl|bosTau2|chr15 (2673580-2673287)
               

               
               311-609, gnl|Hg17|chr7 (89689097-89689411)
               

               
               311-609, gnl|Mm7|chr5 (5512062-5511617)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               311-609, gnl|bosTau2|chr15 (2673580-2673287)
               

               
               311-609, gnl|Hg17|chr7 (89689097-89689411)
               

               
               311-609, gnl|Mm7|chr5 (5512062-5511617)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               mcp (0.170648)
               

               
               lun (0.150489)
               

               
               kid (0.129735)
               

               
               cbl (0.114797)
               

               
               ldo (0.0970026)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               lun (0.150489)
               

               
               kid (0.129735)
               

               
               cbl (0.114797)
               

               
               ldo (0.0970026)

	311-609, gnl\|bosTau2\|chr15 (2673580-2673287)
	311-609, gnl\|Hg17\|chr7 (89689097-89689411)
	311-609, gnl\|Mm7\|chr5 (5512062-5511617)

	mcp (0.170648)
	lun (0.150489)
	kid (0.129735)
	cbl (0.114797)
	ldo (0.0970026)