Non-Coding RNA Search

Ss1.1-ruio19_d23.5

Sequence:


               
               CCTGGAGAGGTCCGTCCTCTTAGCTGAGGACTCAGGTAGAAGTCCCACATGGTCTCCTTT
GCTTTGCTTTCTTTGGACGGTAACTTCTCTCGACCTGTTCACCCGCGATCTCTGTGGACG
TCCTGATGGACGCCATCCGGGCAGACGGAGAGGTGACGGGTCCGCGCTGCATCAGCACCT
CCGTTCGGCTCCTCTCTGCACGAACTCTCCAGTTACACTCACAGTTACAGTCCACTGGAG
GTGGTGCGGGACCCTCGAGAGGTTCGGGAGACTGTTCACGACGACTTCGTATCTCTAATT
TAAACTTTAATGATGATGTCCCTTTAATATGGATTCCATTTGTATTTGTTTTTAAAACCT
TGTAAATAAGAATGTTTGAACTAAAACGTTGTGTTATTGCAAGGGTAGTTCAAGTTTACA
TGGGTTTTACATTGGCAATGATGTGATCACTTTTTTTGATTCTGTGTATTCAGAGGTATT
GAAAACAATTTCCTGTTACTAAATTTTACAACTTCTATTAAGTCTAACTATAAATAATTT
TATGTAAATTGATGAAAACTTGAGCTGATTAATGTATTCTGGTATGATGTTTATGAGTTT
TAATCATTGTAATTGTCCATAATTTGGAATGCTGTTATTTATCAGTAAGTGTAGAATATC
CGAGGCATTTAGCGGCACACGTTAGGTGTTTTAGCACTTGTCCTTGTCCTGTAGTACAAT
TATTAACTGACTGATGTCTTCGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGGAGAGGTCCGTCCTCTTAGCTGAGGACTCAGGTAGAAGTCCCACATGGTCTCCTTT
GCTTTGCTTTCTTTGGACGGTAACTTCTCTCGACCTGTTCACCCGCGATCTCTGTGGACG
TCCTGATGGACGCCATCCGGGCAGACGGAGAGGTGACGGGTCCGCGCTGCATCAGCACCT
CCGTTCGGCTCCTCTCTGCACGAACTCTCCAGTTACACTCACAGTTACAGTCCACTGGAG
GTGGTGCGGGACCCTCGAGAGGTTCGGGAGACTGTTCACGACGACTTCGTATCTCTAATT
TAAACTTTAATGATGATGTCCCTTTAATATGGATTCCATTTGTATTTGTTTTTAAAACCT
TGTAAATAAGAATGTTTGAACTAAAACGTTGTGTTATTGCAAGGGTAGTTCAAGTTTACA
TGGGTTTTACATTGGCAATGATGTGATCACTTTTTTTGATTCTGTGTATTCAGAGGTATT
GAAAACAATTTCCTGTTACTAAATTTTACAACTTCTATTAAGTCTAACTATAAATAATTT
TATGTAAATTGATGAAAACTTGAGCTGATTAATGTATTCTGGTATGATGTTTATGAGTTT
TAATCATTGTAATTGTCCATAATTTGGAATGCTGTTATTTATCAGTAAGTGTAGAATATC
CGAGGCATTTAGCGGCACACGTTAGGTGTTTTAGCACTTGTCCTTGTCCTGTAGTACAAT
TATTAACTGACTGATGTCTTCGTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               52-743, gnl|bosTau2|chr9 (55826538-55827243)
               

               
               52-743, gnl|Hg17|chr6 (159024829-159025518)
               

               
               52-743, gnl|Mm7|chr13 (45708693-45708059)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               52-743, gnl|bosTau2|chr9 (55826538-55827243)
               

               
               52-743, gnl|Hg17|chr6 (159024829-159025518)
               

               
               52-743, gnl|Mm7|chr13 (45708693-45708059)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               lun (0.150489)
               

               
               ski (0.146735)
               

               
               nmm (0.132802)
               

               
               kid (0.129735)
               

               
               thg (0.126791)
               

               
               tra (0.123092)
               

               
               spc (0.113366)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)
               

               
               ski (0.146735)
               

               
               nmm (0.132802)
               

               
               kid (0.129735)
               

               
               thg (0.126791)
               

               
               tra (0.123092)
               

               
               spc (0.113366)

	52-743, gnl\|bosTau2\|chr9 (55826538-55827243)
	52-743, gnl\|Hg17\|chr6 (159024829-159025518)
	52-743, gnl\|Mm7\|chr13 (45708693-45708059)

	lun (0.150489)
	ski (0.146735)
	nmm (0.132802)
	kid (0.129735)
	thg (0.126791)
	tra (0.123092)
	spc (0.113366)