Ss1.1-ruio20_j2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTCAAGGTATTAAATCTTAGAGAAATGGCTTTTATTCATGTGAATATCAGATGTCTATA TACTCTTCTTATTTGCACAGCATTTGGCTCTACTTTGTCTTCAAATGCCGAGATAAAAGT TAATCCTCCTCAAGATTTTGAAATAGTGGACCCTGGATATTTAGGTTATCTCTATTTGCA GTGGCAACCTCCACTGTCTCTGGATAATTTTAAGGAATGCACAGTAGAGTATGAATTAAA ATACCGAAACATTGATAGTGAAAGCTGGAAGACGATCATTACTAAGAATCTACATTACAA AGATGGGTTTGATCTTAACAAAGGTGTTGAAGCAAAAATACATACACTTCTGCCAGGGCA ATGCACTAATGGATCAGAAGTTCAAAGTTCATGGTCAGAAACTACTTATTGGACGTTACC ACAAGGAAATCTGGAAACTAAAATTCAGGATATGGATTGTGTATATTACAACTGGCAGTA TTTACTCTGCTCTTGGAAACCTGGCATGGGTGTCCATTTTGATACCAATTACAACTTGTT TTACTGGTATGAGGGCTTGGACCATGCATTACAGTGTGCTGATTATATCAAGACTAATGG AAAAAATACTGGATGCAGATTTCCCTACTTGGAGTCATCAGACTATAAAGATTTCTACAT CTGTGTTAATGGATCATCAGAATCCCAATCTATTCGACCCAGCTATTTTATTTTTCAGCT TCAAAATATAGTTAAACCTTTGCCACCAGACTACCTTAGTCTTACTGTGAAGAATTCAGA GGAAGTTAACCTGAAATGGAGCATCCCCAGAGGACCTATTCCATCACAGTGTTTTATTTA TGAAATTGAGTTCACAGAAGATGATACTACTTGGGTGACTACCACAGATGAAAATGAAAT ATACATCACAAGAACATCAAATGAAAGCCACCGATTATGTTTTTCAGTAAGAAGCAAAAT GAATATTTATTGCTCAGATGATGGAATATGGAGTGAATGGAGTGATGAACAATGCTGGAA AGGTGACATATGGAAGGAAACCTTAGTATTTTTCTTGATACCATTTGCTTTTGTGTCATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTCAAGGTATTAAATCTTAGAGAAATGGCTTTTATTCATGTGAATATCAGATGTCTATA TACTCTTCTTATTTGCACAGCATTTGGCTCTACTTTGTCTTCAAATGCCGAGATAAAAGT TAATCCTCCTCAAGATTTTGAAATAGTGGACCCTGGATATTTAGGTTATCTCTATTTGCA GTGGCAACCTCCACTGTCTCTGGATAATTTTAAGGAATGCACAGTAGAGTATGAATTAAA ATACCGAAACATTGATAGTGAAAGCTGGAAGACGATCATTACTAAGAATCTACATTACAA AGATGGGTTTGATCTTAACAAAGGTGTTGAAGCAAAAATACATACACTTCTGCCAGGGCA ATGCACTAATGGATCAGAAGTTCAAAGTTCATGGTCAGAAACTACTTATTGGACGTTACC ACAAGGAAATCTGGAAACTAAAATTCAGGATATGGATTGTGTATATTACAACTGGCAGTA TTTACTCTGCTCTTGGAAACCTGGCATGGGTGTCCATTTTGATACCAATTACAACTTGTT TTACTGGTATGAGGGCTTGGACCATGCATTACAGTGTGCTGATTATATCAAGACTAATGG AAAAAATACTGGATGCAGATTTCCCTACTTGGAGTCATCAGACTATAAAGATTTCTACAT CTGTGTTAATGGATCATCAGAATCCCAATCTATTCGACCCAGCTATTTTATTTTTCAGCT TCAAAATATAGTTAAACCTTTGCCACCAGACTACCTTAGTCTTACTGTGAAGAATTCAGA GGAAGTTAACCTGAAATGGAGCATCCCCAGAGGACCTATTCCATCACAGTGTTTTATTTA TGAAATTGAGTTCACAGAAGATGATACTACTTGGGTGACTACCACAGATGAAAATGAAAT ATACATCACAAGAACATCAAATGAAAGCCACCGATTATGTTTTTCAGTAAGAAGCAAAAT GAATATTTATTGCTCAGATGATGGAATATGGAGTGAATGGAGTGATGAACAATGCTGGAA AGGTGACATATGGAAGGAAACCTTAGTATTTTTCTTGATACCATTTGCTTTTGTGTCATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
| 118-269, gnl|bosTau2|chrX (20335661-20335812) | |
| 118-269, gnl|canFam2|chrX (90836104-90836282) | |
| 118-269, gnl|echTel1|scaffold_309426 (163297-163123) | |
| 118-269, gnl|hg17|chrX (114073205-114073382) | |
| 118-269, gnl|Hg17|chrX (114073366-114073215) | |
| 118-269, gnl|mm7|chrX (142060416-142060591) | |
| 118-269, gnl|Mm7|chrX (142060577-142060426) | |
| 118-269, gnl|monDom2|scaffold_117 (1072767-1072590) | |
| 118-269, gnl|oryCun1|scaffold_203093 (51945-52123) | |
| 118-269, gnl|panTro1|chrX (117959634-117959811) | |
| 118-269, gnl|rheMac2|chrX (113519370-113519547) | |
| 118-269, gnl|rn3|chrX (30572466-30572644) | |
| 270-426, gnl|bosTau2|chrX (20336861-20337017) | |
| 270-426, gnl|canFam2|chrX (90834726-90834984) | |
| 270-426, gnl|echTel1|scaffold_309426 (164771-164509) | |
| 270-426, gnl|hg17|chrX (114071921-114072182) | |
| 270-426, gnl|Hg17|chrX (114072119-114071963) | |
| 270-426, gnl|loxAfr1|scaffold_48734 (9875-10122) | |
| 270-426, gnl|mm7|chrX (142059299-142059540) | |
| 270-426, gnl|Mm7|chrX (142059494-142059338) | |
| 270-426, gnl|monDom2|scaffold_117 (1074402-1074140) | |
| 270-426, gnl|oryCun1|scaffold_203093 (50673-50928) | |
| 270-426, gnl|panTro1|chrX (117958350-117958611) | |
| 270-426, gnl|rheMac2|chrX (113518105-113518366) | |
| 270-426, gnl|rn3|chrX (30571330-30571584) | |
| 539-731, gnl|bosTau2|chrX (20341188-20341380) | |
| 539-731, gnl|canFam2|chrX (90830596-90830901) | |
| 539-731, gnl|dasNov1|scaffold_48694 (2239-1943) | |
| 539-731, gnl|echTel1|scaffold_309426 (172147-171855) | |
| 539-731, gnl|hg17|chrX (114068028-114068376) | |
| 539-731, gnl|Hg17|chrX (114068379-114068187) | |
| 539-731, gnl|loxAfr1|scaffold_48734 (6272-6598) | |
| 539-731, gnl|mm7|chrX (142055035-142055355) | |
| 539-731, gnl|Mm7|chrX (142055360-142055166) | |
| 539-731, gnl|monDom2|scaffold_117 (1095674-1095318) | |
| 539-731, gnl|oryCun1|scaffold_203093 (47942-48264) | |
| 539-731, gnl|panTro1|chrX (117954147-117954495) | |
| 539-731, gnl|rheMac2|chrX (113513976-113514316) | |
| 539-731, gnl|rn3|chrX (30567379-30567698) | |
| 877-1051, gnl|bosTau2|chrX (20343834-20344008) | |
| 877-1051, gnl|Hg17|chrX (114065620-114065454) | |
| 877-1051, gnl|Mm7|chrX (142052686-142052536) |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 118-269, gnl|bosTau2|chrX (20335661-20335812) | |
| 118-269, gnl|canFam2|chrX (90836104-90836282) | |
| 118-269, gnl|echTel1|scaffold_309426 (163297-163123) | |
| 118-269, gnl|hg17|chrX (114073205-114073382) | |
| 118-269, gnl|Hg17|chrX (114073366-114073215) | |
| 118-269, gnl|mm7|chrX (142060416-142060591) | |
| 118-269, gnl|Mm7|chrX (142060577-142060426) | |
| 118-269, gnl|monDom2|scaffold_117 (1072767-1072590) | |
| 118-269, gnl|oryCun1|scaffold_203093 (51945-52123) | |
| 118-269, gnl|panTro1|chrX (117959634-117959811) | |
| 118-269, gnl|rheMac2|chrX (113519370-113519547) | |
| 118-269, gnl|rn3|chrX (30572466-30572644) | |
| 270-426, gnl|bosTau2|chrX (20336861-20337017) | |
| 270-426, gnl|canFam2|chrX (90834726-90834984) | |
| 270-426, gnl|echTel1|scaffold_309426 (164771-164509) | |
| 270-426, gnl|hg17|chrX (114071921-114072182) | |
| 270-426, gnl|Hg17|chrX (114072119-114071963) | |
| 270-426, gnl|loxAfr1|scaffold_48734 (9875-10122) | |
| 270-426, gnl|mm7|chrX (142059299-142059540) | |
| 270-426, gnl|Mm7|chrX (142059494-142059338) | |
| 270-426, gnl|monDom2|scaffold_117 (1074402-1074140) | |
| 270-426, gnl|oryCun1|scaffold_203093 (50673-50928) | |
| 270-426, gnl|panTro1|chrX (117958350-117958611) | |
| 270-426, gnl|rheMac2|chrX (113518105-113518366) | |
| 270-426, gnl|rn3|chrX (30571330-30571584) | |
| 539-731, gnl|bosTau2|chrX (20341188-20341380) | |
| 539-731, gnl|canFam2|chrX (90830596-90830901) | |
| 539-731, gnl|dasNov1|scaffold_48694 (2239-1943) | |
| 539-731, gnl|echTel1|scaffold_309426 (172147-171855) | |
| 539-731, gnl|hg17|chrX (114068028-114068376) | |
| 539-731, gnl|Hg17|chrX (114068379-114068187) | |
| 539-731, gnl|loxAfr1|scaffold_48734 (6272-6598) | |
| 539-731, gnl|mm7|chrX (142055035-142055355) | |
| 539-731, gnl|Mm7|chrX (142055360-142055166) | |
| 539-731, gnl|monDom2|scaffold_117 (1095674-1095318) | |
| 539-731, gnl|oryCun1|scaffold_203093 (47942-48264) | |
| 539-731, gnl|panTro1|chrX (117954147-117954495) | |
| 539-731, gnl|rheMac2|chrX (113513976-113514316) | |
| 539-731, gnl|rn3|chrX (30567379-30567698) | |
| 877-1051, gnl|bosTau2|chrX (20343834-20344008) | |
| 877-1051, gnl|Hg17|chrX (114065620-114065454) | |
| 877-1051, gnl|Mm7|chrX (142052686-142052536) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| liv (0.292569) | |
| tes (0.207814) | |
| kid (0.129735) | |
| ret (0.128733) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| liv (0.292569) | |
| tes (0.207814) | |
| kid (0.129735) | |
| ret (0.128733) |