Non-Coding RNA Search

Ss1.1-ruio21_n10.5

Sequence:


               
               CGCGGTCGAGGCACTCCCAGGCCCCGGGGAAGTGTAGGGTGTCGGGCCGGGTTCACCGAG
CGGTCCAAAGGGGTGGGAGCCTCGAGCCCCGCGGTGGCACGCCGGGGGCGCGGGGCGGGG
GAGACTCTTACCCGGAGGTGCCGAACAGGAGGCGGCGGTGGGCCCTGGAGGCTACTGTAA
TCCACTAGGCGCTGCCGGGCTGCGCACGCTCTGGGCTTCTTCATGTTGGAGAAAGAGCCG
CGTCGGAAGCGCGCGGCTCGGTCACCCGGAGCATGCCGGCTGCTCCCGGCGGGCGGTGCC
GGCGCCGGCGGGGGCCTCGGTGCCCGGGGCTCCTTCCGGGCTCTCCCGCCCGCCGGGCTC
CCTACCGGCTTCGGAAGCGGCAGCGGCGCTGCCGGGGCGAATCGGCGGTGGGGCCAGGTT
GAGCGCCGGGCGGGAGACGAAGCCGCCGCGGACCCCGCGATCCCGCAGCCGGCGACTGGA
GCCCACCTCTGCAGAGACAAAGATGCCTGAGGATTCAGCAAACACTGAAGAAGCAGAGGA
CACAAGTTTGGATGTGAAAGAGCAACACCTTCTGCACTGAAGAATAATTAGACAATATTT
TTAATTATACAAGAAAATCCAGCATGTTGTTGGACCCTTCCAAGCTAGAGCACTTTATAT
GGGTCTATACATGTGGAAGGTGAACAGAGATTGTTTAATTCTAAGATATTCTGAGAAAGA
ACCTCAATTGTCATTTTTCCTCTACCTAAAAAAAATGCACAGCTTTATGACCGTCCTTTT
CTGCTCGGGGAAAGAGGGCTAGGAAAAAAACTGCACTTTTGAAAAGGCAGCCATATTTGC
ATTTTCCCCTCTTGTGCAGAGGTAAGCCATGTGCTAGGCTTTGTGGAACTTCACAAAATG
GCAGCCCATGAACTGACTTTTCTCTAGGAACCATTGAGACCCACACCCCCTTTTGTGTGT
TTCTGGTCCATGAAAACAGAGAATCTGATTCACTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGGTCGAGGCACTCCCAGGCCCCGGGGAAGTGTAGGGTGTCGGGCCGGGTTCACCGAG
CGGTCCAAAGGGGTGGGAGCCTCGAGCCCCGCGGTGGCACGCCGGGGGCGCGGGGCGGGG
GAGACTCTTACCCGGAGGTGCCGAACAGGAGGCGGCGGTGGGCCCTGGAGGCTACTGTAA
TCCACTAGGCGCTGCCGGGCTGCGCACGCTCTGGGCTTCTTCATGTTGGAGAAAGAGCCG
CGTCGGAAGCGCGCGGCTCGGTCACCCGGAGCATGCCGGCTGCTCCCGGCGGGCGGTGCC
GGCGCCGGCGGGGGCCTCGGTGCCCGGGGCTCCTTCCGGGCTCTCCCGCCCGCCGGGCTC
CCTACCGGCTTCGGAAGCGGCAGCGGCGCTGCCGGGGCGAATCGGCGGTGGGGCCAGGTT
GAGCGCCGGGCGGGAGACGAAGCCGCCGCGGACCCCGCGATCCCGCAGCCGGCGACTGGA
GCCCACCTCTGCAGAGACAAAGATGCCTGAGGATTCAGCAAACACTGAAGAAGCAGAGGA
CACAAGTTTGGATGTGAAAGAGCAACACCTTCTGCACTGAAGAATAATTAGACAATATTT
TTAATTATACAAGAAAATCCAGCATGTTGTTGGACCCTTCCAAGCTAGAGCACTTTATAT
GGGTCTATACATGTGGAAGGTGAACAGAGATTGTTTAATTCTAAGATATTCTGAGAAAGA
ACCTCAATTGTCATTTTTCCTCTACCTAAAAAAAATGCACAGCTTTATGACCGTCCTTTT
CTGCTCGGGGAAAGAGGGCTAGGAAAAAAACTGCACTTTTGAAAAGGCAGCCATATTTGC
ATTTTCCCCTCTTGTGCAGAGGTAAGCCATGTGCTAGGCTTTGTGGAACTTCACAAAATG
GCAGCCCATGAACTGACTTTTCTCTAGGAACCATTGAGACCCACACCCCCTTTTGTGTGT
TTCTGGTCCATGAAAACAGAGAATCTGATTCACTTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               9-502, gnl|bosTau2|chr2 (16985525-16986029)
               

               
               9-502, gnl|Hg17|chr2 (176827352-176826856)
               

               
               9-502, gnl|Mm7|chr2 (74556135-74555686)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-502, gnl|bosTau2|chr2 (16985525-16986029)
               

               
               9-502, gnl|Hg17|chr2 (176827352-176826856)
               

               
               9-502, gnl|Mm7|chr2 (74556135-74555686)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               sme (0.305437)
               

               
               ute (0.132784)
               

               
               kid (0.129735)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)
               

               
               ute (0.132784)
               

               
               kid (0.129735)

	9-502, gnl\|bosTau2\|chr2 (16985525-16986029)
	9-502, gnl\|Hg17\|chr2 (176827352-176826856)
	9-502, gnl\|Mm7\|chr2 (74556135-74555686)