Non-Coding RNA Search

Ss1.1-ruio21_p23.5

Sequence:


               
               TACTTCCCTTAAAAAGAGTCACTTGGTATCATCAATAAAATGACCATACTCTGTTCTTCC
TTGTTCTTGGTAGAACATACAAATTCTGCCCTCATGAGACAGCTACACAATTTGACAGCT
TATACTCGAAATCATTCAAAAAGGAAGAGAAAACAGCTCAATGCATTTATTCTGTGATGT
TCAGCTCTACATTCTGGCATTGCCAACGGTTTAGTCACAGATAAATTATGGGTTTGTGTA
TACAGAAGAAAGATATTAATACCCCCCACTCGTTATATTCAGTCTTCTGAATATTTCAGG
TTTTAGAAATAAAATTGTTGATGGGAACACCATACAATGGGATGGCCTGACTCTAAGTTT
GCCCCATGCTGTGTGAGGCCAACTGCCTAATGGATTTGTGACAGACCTTCTCCTGGCTGA
TAGGTATCAGAAGCTGTGACAGTGAAGCCATGATGGGAACAGAGAGGTGGGCAAGGGAGC
TCCTAGTGGAAGTTTTGATCATTTAACTTTATGCCCAGTTCCATAATTGTGCTTTCAAAT
GTAATTCTAGCTGCCAATTTACACTTTACCAGGGCTAAAACTTATTTTTAGTTTCATTTC
CATGGAAAATGTGCACTTTGCTCTTGATTGATAGGTATATTTTGACAGTTAATACAGGTT
TACCCAGTCAAGGCTTGTTTTAGTTGAAGGTGAAAATGGAAGAGGAAAAAAAAATTACTT
CAACAGACCTTAGTATTTCTCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTTCCCTTAAAAAGAGTCACTTGGTATCATCAATAAAATGACCATACTCTGTTCTTCC
TTGTTCTTGGTAGAACATACAAATTCTGCCCTCATGAGACAGCTACACAATTTGACAGCT
TATACTCGAAATCATTCAAAAAGGAAGAGAAAACAGCTCAATGCATTTATTCTGTGATGT
TCAGCTCTACATTCTGGCATTGCCAACGGTTTAGTCACAGATAAATTATGGGTTTGTGTA
TACAGAAGAAAGATATTAATACCCCCCACTCGTTATATTCAGTCTTCTGAATATTTCAGG
TTTTAGAAATAAAATTGTTGATGGGAACACCATACAATGGGATGGCCTGACTCTAAGTTT
GCCCCATGCTGTGTGAGGCCAACTGCCTAATGGATTTGTGACAGACCTTCTCCTGGCTGA
TAGGTATCAGAAGCTGTGACAGTGAAGCCATGATGGGAACAGAGAGGTGGGCAAGGGAGC
TCCTAGTGGAAGTTTTGATCATTTAACTTTATGCCCAGTTCCATAATTGTGCTTTCAAAT
GTAATTCTAGCTGCCAATTTACACTTTACCAGGGCTAAAACTTATTTTTAGTTTCATTTC
CATGGAAAATGTGCACTTTGCTCTTGATTGATAGGTATATTTTGACAGTTAATACAGGTT
TACCCAGTCAAGGCTTGTTTTAGTTGAAGGTGAAAATGGAAGAGGAAAAAAAAATTACTT
CAACAGACCTTAGTATTTCTCTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               141-744, gnl|bosTau2|chr4 (2482698-2482103)
               

               
               141-744, gnl|Hg17|chr7 (94570936-94570351)
               

               
               141-744, gnl|Mm7|chr6 (5119089-5118532)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               141-744, gnl|bosTau2|chr4 (2482698-2482103)
               

               
               141-744, gnl|Hg17|chr7 (94570936-94570351)
               

               
               141-744, gnl|Mm7|chr6 (5119089-5118532)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               kid (0.259471)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.259471)

	141-744, gnl\|bosTau2\|chr4 (2482698-2482103)
	141-744, gnl\|Hg17\|chr7 (94570936-94570351)
	141-744, gnl\|Mm7\|chr6 (5119089-5118532)