Non-Coding RNA Search

Ss1.1-ruio23_d20.5

Sequence:


               
               TAGATTTAAAATAACTGGATTTAAGTTTTCAAATGTTGAAAAGTGCCTGAAAAGTGGTGA
CTTCTTCCTTAAATGGCCCAACAACTTGGCCTGTGTAAGATTGTTGGAATCAACAGGAAC
AGCTTGGTTGGTTAAAACCCAAAGATATCTCTGGTGCATCAAAGGGCAAGATGCAAACCA
GTCTAGAGATTTTGTTTATAATAGAGAAAGCTGATGACTTTGATAACAGAGACTGACGTT
TTCATTTTGTAGAATTGGCCAGATAAAGGGTTTAACCTTGTCACCTTCCTCTGTTTGTTA
GCTGTGTTCTTTCATAGTGATTCTTTCTGTACTAGGAAGAAATATGGGACTATGTAATGT
TTGGATCTTAGGGCAAACTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTTTGGAGTAGTATATAGTCCATTTGAAATAGAAATCAAACAGATCCTTCACCATGC
TGTTATCTGGATGGAATAACTCACCATTGGATGTAATGGCCTAACATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGATTTAAAATAACTGGATTTAAGTTTTCAAATGTTGAAAAGTGCCTGAAAAGTGGTGA
CTTCTTCCTTAAATGGCCCAACAACTTGGCCTGTGTAAGATTGTTGGAATCAACAGGAAC
AGCTTGGTTGGTTAAAACCCAAAGATATCTCTGGTGCATCAAAGGGCAAGATGCAAACCA
GTCTAGAGATTTTGTTTATAATAGAGAAAGCTGATGACTTTGATAACAGAGACTGACGTT
TTCATTTTGTAGAATTGGCCAGATAAAGGGTTTAACCTTGTCACCTTCCTCTGTTTGTTA
GCTGTGTTCTTTCATAGTGATTCTTTCTGTACTAGGAAGAAATATGGGACTATGTAATGT
TTGGATCTTAGGGCAAACTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTTTGGAGTAGTATATAGTCCATTTGAAATAGAAATCAAACAGATCCTTCACCATGC
TGTTATCTGGATGGAATAACTCACCATTGGATGTAATGGCCTAACATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-390, gnl|bosTau2|chr1 (94046360-94045976)
               

               
               1-390, gnl|Hg17|chr6 (18575663-18576352)
               

               
               1-390, gnl|Mm7|chr13 (46729049-46729405)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-390, gnl|bosTau2|chr1 (94046360-94045976)
               

               
               1-390, gnl|Hg17|chr6 (18575663-18576352)
               

               
               1-390, gnl|Mm7|chr13 (46729049-46729405)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               tbr (0.154178)
               

               
               ssp (0.13552)
               

               
               kid (0.129735)
               

               
               bla (0.124347)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               ssp (0.13552)
               

               
               kid (0.129735)
               

               
               bla (0.124347)

	1-390, gnl\|bosTau2\|chr1 (94046360-94045976)
	1-390, gnl\|Hg17\|chr6 (18575663-18576352)
	1-390, gnl\|Mm7\|chr13 (46729049-46729405)