Non-Coding RNA Search

Ss1.1-ruio24_i12.5

Sequence:


               
               AAAAATTGCTAATCTTTTCATTCAGGTTTAAATTGATGCCAGGTAATTCCAGTATTGAGC
ATCTTAAATCTCTTACTTGGAATATGGATTGAGTTTGGCGCTAACTCAGAGGACTACAGG
TGGATATTACTATCCCTTATTCATGGAAAAAGTTTTATTCTAAGTGTTGTGTCTCATTGA
GTATTAGCAAAAAGGAGAAATATTAATGCTTTTGAGATAGATTTGGCTCTAGTAAGTACT
GAGATGTATTATTTGCATATCTGGGAGAAGAAATGAGAGACCATCATCAGTACATTTCCA
GCTAAAATTCTATATTTTCTTGCATCTCATGAAGGGATTCCTTATAATTTCTGTTTTATT
ACTAATAGCTTGAACCCCTTTAATGGAGAATTAATTTCTCCACCAGAGTTTAAAAATTTA
TGTTCTTACCTTGTTTATTTATAAAATATATCCCACAGATTTCTGATGTCTATTTTTTAG
GCTATATACAAGTAAGAAATGTTGGCAAAATAAATAAGTTTAAACCTTTTATATTAAAAT
TACTATGCAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAATTGCTAATCTTTTCATTCAGGTTTAAATTGATGCCAGGTAATTCCAGTATTGAGC
ATCTTAAATCTCTTACTTGGAATATGGATTGAGTTTGGCGCTAACTCAGAGGACTACAGG
TGGATATTACTATCCCTTATTCATGGAAAAAGTTTTATTCTAAGTGTTGTGTCTCATTGA
GTATTAGCAAAAAGGAGAAATATTAATGCTTTTGAGATAGATTTGGCTCTAGTAAGTACT
GAGATGTATTATTTGCATATCTGGGAGAAGAAATGAGAGACCATCATCAGTACATTTCCA
GCTAAAATTCTATATTTTCTTGCATCTCATGAAGGGATTCCTTATAATTTCTGTTTTATT
ACTAATAGCTTGAACCCCTTTAATGGAGAATTAATTTCTCCACCAGAGTTTAAAAATTTA
TGTTCTTACCTTGTTTATTTATAAAATATATCCCACAGATTTCTGATGTCTATTTTTTAG
GCTATATACAAGTAAGAAATGTTGGCAAAATAAATAAGTTTAAACCTTTTATATTAAAAT
TACTATGCAGAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               278-550, gnl|bosTau2|chr12 (8335857-8335598)
               

               
               278-550, gnl|Hg17|chr13 (49516753-49516467)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               278-550, gnl|bosTau2|chr12 (8335857-8335598)
               

               
               278-550, gnl|Hg17|chr13 (49516753-49516467)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               kid (0.259471)
               

               
               lin (0.145603)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.259471)
               

               
               lin (0.145603)

	278-550, gnl\|bosTau2\|chr12 (8335857-8335598)
	278-550, gnl\|Hg17\|chr13 (49516753-49516467)