Non-Coding RNA Search

Ss1.1-ruio25_a16.5

Sequence:


               
               CTTGATATCCGCAAAGTCTGAAAAGTCACTTCCGAATTTTGTCTATTGGAGTACCTTTCT
TTAGGAAACTGAGGAATTTTATAGTAAATTCATTAGTATCTCTATACTTACAAATGTTAT
CTTAGTTGTAAAAAATAATTTGACCTGTATTTCTTTTATATAGACTTTTTAAGTGCATTT
AAAATACTTGAATTTTTTCAAATATACATCAAGGCTTACCAAAATGTAATTTACCTGTTA
TTGTGATGGCATAATTACCAAAAAGAAAAGCAGTCTTTATTTTCTGAGACAAACAGTACT
TCATTGAAATAATCATTTCAATCTAGGACATGACATTTAAGAGGGACAAATATATTAGGT
ATCTTATGTGCCCTCCTTTTAGAGGAGACATTTCAGTTAAGAAAGCTTAATCCTGTTGTC
TGAATTATGATAAATGGTAAGAGAATTGAAAGTGGTTCTATCTTAGAAGGTTTGTTTCAG
TAATAAGTAAGATTTGGTTCATTGGAATAAATGATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGATATCCGCAAAGTCTGAAAAGTCACTTCCGAATTTTGTCTATTGGAGTACCTTTCT
TTAGGAAACTGAGGAATTTTATAGTAAATTCATTAGTATCTCTATACTTACAAATGTTAT
CTTAGTTGTAAAAAATAATTTGACCTGTATTTCTTTTATATAGACTTTTTAAGTGCATTT
AAAATACTTGAATTTTTTCAAATATACATCAAGGCTTACCAAAATGTAATTTACCTGTTA
TTGTGATGGCATAATTACCAAAAAGAAAAGCAGTCTTTATTTTCTGAGACAAACAGTACT
TCATTGAAATAATCATTTCAATCTAGGACATGACATTTAAGAGGGACAAATATATTAGGT
ATCTTATGTGCCCTCCTTTTAGAGGAGACATTTCAGTTAAGAAAGCTTAATCCTGTTGTC
TGAATTATGATAAATGGTAAGAGAATTGAAAGTGGTTCTATCTTAGAAGGTTTGTTTCAG
TAATAAGTAAGATTTGGTTCATTGGAATAAATGATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-505, gnl|bosTau2|chr13 (17394592-17394103)
               

               
               2-505, gnl|Hg17|chr10 (14952016-14952555)
               

               
               2-505, gnl|Mm7|chr2 (3407541-3407095)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-505, gnl|bosTau2|chr13 (17394592-17394103)
               

               
               2-505, gnl|Hg17|chr10 (14952016-14952555)
               

               
               2-505, gnl|Mm7|chr2 (3407541-3407095)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               kid (0.129735)

	2-505, gnl\|bosTau2\|chr13 (17394592-17394103)
	2-505, gnl\|Hg17\|chr10 (14952016-14952555)
	2-505, gnl\|Mm7\|chr2 (3407541-3407095)