Non-Coding RNA Search

Ss1.1-ruio26_h23.5

Sequence:


               
               CTGCTGTTTACAGTCTTATAGAGAGGAACTGATTATGGGTTATACCTGAGTAAGAGCTTG
GAGCCCGCTTATATCCATGGTCACGTTTGGATCTTTTGAATACCACTTAGTTTTTAAATC
ATTTTTCCCTGCTCTTTCATCCTATAATTTCTGTGTTTTAGAACTTCATTTGTCCACAAA
TTAAAACGTAGATGTTTTTAAAAATACATGCTGGATTGAAAGTTGTTTATGTATTGATTC
AAAACCTAAATATAAGGGAGGGAGAACCTTTTTGGGTTTTTTGGTTTTGTTTTAAATATT
GATTTATTTTATTATTCAAGTAACACATAATCATTGCTGAAAATTTAGAAAATACAGAAA
AGAGAAGAAAATGATAATATTTTTATTCAACACTGCAGAGACAGGCACTATAAATCATGT
AGTGTGTCGGAACATATAACGTCGTATATGTATACAGGGGAGAAGCCTTTTGGATGCTCA
GTCTTTCCCTTGCTCCAATAGAATTTGTTTCGTTAGAAGTTAAATTGCCTCTCAGGGAAC
CTTCTAGGTAGAATATTTTGACAAAAATTTATTGAACTCTTGAGAGAATGTTTTGTAACT
ATTACCTTCAATAGCTAATCTTTTTTTCTATTCCAGGCTTGCTGGTGGATCCCCTCCTTA
TTCCCCAATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCTGTTTACAGTCTTATAGAGAGGAACTGATTATGGGTTATACCTGAGTAAGAGCTTG
GAGCCCGCTTATATCCATGGTCACGTTTGGATCTTTTGAATACCACTTAGTTTTTAAATC
ATTTTTCCCTGCTCTTTCATCCTATAATTTCTGTGTTTTAGAACTTCATTTGTCCACAAA
TTAAAACGTAGATGTTTTTAAAAATACATGCTGGATTGAAAGTTGTTTATGTATTGATTC
AAAACCTAAATATAAGGGAGGGAGAACCTTTTTGGGTTTTTTGGTTTTGTTTTAAATATT
GATTTATTTTATTATTCAAGTAACACATAATCATTGCTGAAAATTTAGAAAATACAGAAA
AGAGAAGAAAATGATAATATTTTTATTCAACACTGCAGAGACAGGCACTATAAATCATGT
AGTGTGTCGGAACATATAACGTCGTATATGTATACAGGGGAGAAGCCTTTTGGATGCTCA
GTCTTTCCCTTGCTCCAATAGAATTTGTTTCGTTAGAAGTTAAATTGCCTCTCAGGGAAC
CTTCTAGGTAGAATATTTTGACAAAAATTTATTGAACTCTTGAGAGAATGTTTTGTAACT
ATTACCTTCAATAGCTAATCTTTTTTTCTATTCCAGGCTTGCTGGTGGATCCCCTCCTTA
TTCCCCAATATA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               72-275, gnl|bosTau2|chr15 (48733115-48733316)
               

               
               72-275, gnl|Hg17|chr11 (47601230-47601066)
               

               
               72-275, gnl|Mm7|chr2 (90713697-90714007)
               


               
               468-672, gnl|bosTau2|chr15 (48733311-48733518)
               

               
               468-672, gnl|Hg17|chr11 (47601071-47600869)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               72-275, gnl|bosTau2|chr15 (48733115-48733316)
               

               
               72-275, gnl|Hg17|chr11 (47601230-47601066)
               

               
               72-275, gnl|Mm7|chr2 (90713697-90714007)
               


               
               468-672, gnl|bosTau2|chr15 (48733311-48733518)
               

               
               468-672, gnl|Hg17|chr11 (47601071-47600869)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               liv (0.146284)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               kid (0.129735)

	72-275, gnl\|bosTau2\|chr15 (48733115-48733316)
	72-275, gnl\|Hg17\|chr11 (47601230-47601066)
	72-275, gnl\|Mm7\|chr2 (90713697-90714007)

	468-672, gnl\|bosTau2\|chr15 (48733311-48733518)
	468-672, gnl\|Hg17\|chr11 (47601071-47600869)