Ss1.1-ruio26_i5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAAGGCAAAAAATAAAAGTAAAAAAATAAGAACAAAGTGATGTTTCTATCCCTCTTACA ACTTGTTTTATAATTATCATTGCCAGTAGTTTGGGCTTGTTTAGAAAACTTATGGTGTAA AAATTTAAATTCATCAAGTTTATGTTTTTAAGTTTCAAGAGCTCTTATTGAAAGACCATG AATTGAAAACCATCTAAATAATATTGTTTGTTTTTAAATTTACAAATACTAGTCTATCCT TGATTTTTCACTGCAGGTTATGAAACTATTGGAATATGGGCTAATTACCTTGTGTCCCTG TACATAGTGAATTCAGAAATAGTAGCATGGTATACATATATTTCCACTTTAACTCAAGAA TTTCAGGAGGTAATTTTTTGATATTGCAGGTTTCTAACACTTTCATTATTCTGTGATAGT ATTATTCACTTACATGTCTTCCAGAGGAAAGTACCAGTTTCGGTCAAGAAAAGTGCCAAT CAGACACAAAAAGATTTCCTTATTTTTTTTAGGCTTTCTATATCCTATACATGGAAGCAG GGAATTGAAATATTTTCCAGCTGTACGGTAATGGCAAGTCCTCAGAAACTTATTGATAGA GTGTGAAACAACAGCAAGAGAGGACACAATAACTGTAAAACATATTAGTCTAAGGCCACT TAATTTAAAGAAAGCAATCACTCTAGTCATAGAAATAGTTTGATAAGTCACTAAGTAATT GACATTCACAATGATTTTTAGTCATCAAGGATTTCATTGTACTCAGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAAGGCAAAAAATAAAAGTAAAAAAATAAGAACAAAGTGATGTTTCTATCCCTCTTACA ACTTGTTTTATAATTATCATTGCCAGTAGTTTGGGCTTGTTTAGAAAACTTATGGTGTAA AAATTTAAATTCATCAAGTTTATGTTTTTAAGTTTCAAGAGCTCTTATTGAAAGACCATG AATTGAAAACCATCTAAATAATATTGTTTGTTTTTAAATTTACAAATACTAGTCTATCCT TGATTTTTCACTGCAGGTTATGAAACTATTGGAATATGGGCTAATTACCTTGTGTCCCTG TACATAGTGAATTCAGAAATAGTAGCATGGTATACATATATTTCCACTTTAACTCAAGAA TTTCAGGAGGTAATTTTTTGATATTGCAGGTTTCTAACACTTTCATTATTCTGTGATAGT ATTATTCACTTACATGTCTTCCAGAGGAAAGTACCAGTTTCGGTCAAGAAAAGTGCCAAT CAGACACAAAAAGATTTCCTTATTTTTTTTAGGCTTTCTATATCCTATACATGGAAGCAG GGAATTGAAATATTTTCCAGCTGTACGGTAATGGCAAGTCCTCAGAAACTTATTGATAGA GTGTGAAACAACAGCAAGAGAGGACACAATAACTGTAAAACATATTAGTCTAAGGCCACT TAATTTAAAGAAAGCAATCACTCTAGTCATAGAAATAGTTTGATAAGTCACTAAGTAATT GACATTCACAATGATTTTTAGTCATCAAGGATTTCATTGTACTCAGCA |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 21-506, gnl|bosTau2|chr7 (63347801-63347318) | |
| 21-506, gnl|Hg17|chr5 (101600461-101599630) | |
| 21-506, gnl|Mm7|chr1 (96670831-96669880) | |
| 617-768, gnl|bosTau2|chr7 (63345657-63345501) | |
| 617-768, gnl|canFam2|chr3 (11710274-11709676) | |
| 617-768, gnl|canFam2|chr3 (11709807-11709673) | |
| 617-768, gnl|dasNov1|scaffold_14029 (3160-2543) | |
| 617-768, gnl|dasNov1|scaffold_14029 (2681-2553) | |
| 617-768, gnl|echTel1|scaffold_310563 (34981-35582) | |
| 617-768, gnl|echTel1|scaffold_310563 (35430-35568) | |
| 617-768, gnl|hg17|chr11 (63065724-63066348) | |
| 617-768, gnl|hg17|chr5 (101598113-101598251) | |
| 617-768, gnl|Hg17|chr5 (101598306-101598123) | |
| 617-768, gnl|loxAfr1|scaffold_48443 (39838-39205) | |
| 617-768, gnl|loxAfr1|scaffold_48443 (39342-39205) | |
| 617-768, gnl|mm7|chr1 (96668203-96668789) | |
| 617-768, gnl|mm7|chr1 (96668644-96668773) | |
| 617-768, gnl|Mm7|chr1 (96668828-96668654) | |
| 617-768, gnl|panTro1|chr4 (107426495-107426632) | |
| 617-768, gnl|panTro1|chr9 (64057284-64057909) | |
| 617-768, gnl|rheMac2|chr6 (98476846-98477457) | |
| 617-768, gnl|rheMac2|chr6 (98477303-98477441) | |
| 617-768, gnl|rn3|chr9 (96249565-96250146) | |
| 617-768, gnl|rn3|chr9 (96250007-96250130) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 21-506, gnl|bosTau2|chr7 (63347801-63347318) | |
| 21-506, gnl|Hg17|chr5 (101600461-101599630) | |
| 21-506, gnl|Mm7|chr1 (96670831-96669880) | |
| 617-768, gnl|bosTau2|chr7 (63345657-63345501) | |
| 617-768, gnl|canFam2|chr3 (11710274-11709676) | |
| 617-768, gnl|canFam2|chr3 (11709807-11709673) | |
| 617-768, gnl|dasNov1|scaffold_14029 (3160-2543) | |
| 617-768, gnl|dasNov1|scaffold_14029 (2681-2553) | |
| 617-768, gnl|echTel1|scaffold_310563 (34981-35582) | |
| 617-768, gnl|echTel1|scaffold_310563 (35430-35568) | |
| 617-768, gnl|hg17|chr11 (63065724-63066348) | |
| 617-768, gnl|hg17|chr5 (101598113-101598251) | |
| 617-768, gnl|Hg17|chr5 (101598306-101598123) | |
| 617-768, gnl|loxAfr1|scaffold_48443 (39838-39205) | |
| 617-768, gnl|loxAfr1|scaffold_48443 (39342-39205) | |
| 617-768, gnl|mm7|chr1 (96668203-96668789) | |
| 617-768, gnl|mm7|chr1 (96668644-96668773) | |
| 617-768, gnl|Mm7|chr1 (96668828-96668654) | |
| 617-768, gnl|panTro1|chr4 (107426495-107426632) | |
| 617-768, gnl|panTro1|chr9 (64057284-64057909) | |
| 617-768, gnl|rheMac2|chr6 (98476846-98477457) | |
| 617-768, gnl|rheMac2|chr6 (98477303-98477441) | |
| 617-768, gnl|rn3|chr9 (96249565-96250146) | |
| 617-768, gnl|rn3|chr9 (96250007-96250130) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| kid (0.129735) | |
| med (0.116252) |