Non-Coding RNA Search

Ss1.1-ruio28_a10.5

Sequence:


               
               TGAACTGAAGTTACCTCCTCCAGTGAGAAATTAGAAGGTGATGCCCTGCAACGGATACGT
ATTCCTCTCTCCCTTCTTCCCTGATAAGCCTTGTAAAGTTTTGAAATTTTGTCCTGTACC
ATTTAAGCCAGTGTCTATGGCAGAAACAATTGGCAGGCCAGCTGATGAGTTCTGCTTTCA
GATGGCACTGAGATGAGTGAGCAAGGGAAGAGTTAATAGGCCTTTGGTCAGTGTTTTTTG
CATTCTCATTCGATGAGCAAGACATTGGACCAACAGCCAATGAGATGTAAACCCATAAGA
AAAGTCCTAGGGTATAGAGTTTTTCCCTCTATGGAAGCAAGGTGAAGAAATATAGTGGTG
CCAGATGAGGAAGGCTGCTTTTGGGAGATTTGAAAAGTACATTCCTGCCTTATCAGCAAA
TGTGGCAGATAGGCTTTAAGTCAATCTCAGTACACTGTGCTGTCTATGCTTTGATAAAGA
CAGTGTTCCAGTGAGAATGTGAGAGAGGAAGGGAACCGCACTTTGCTTCACCATCAGAAC
TCTGAGCCGAGTAATGAAATATTTAAACTATTTTATGATTATTTTAAATTTTTGTTTGTA
ACACTTAGAGGGTATATTTTTATTTGGGGATAGACTAAGAAGCCACCATTTACATAAACA
AGTGAGTTGAACTTGAGGCGCCTGTGTAGATTTATTAAATGGCTGCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAACTGAAGTTACCTCCTCCAGTGAGAAATTAGAAGGTGATGCCCTGCAACGGATACGT
ATTCCTCTCTCCCTTCTTCCCTGATAAGCCTTGTAAAGTTTTGAAATTTTGTCCTGTACC
ATTTAAGCCAGTGTCTATGGCAGAAACAATTGGCAGGCCAGCTGATGAGTTCTGCTTTCA
GATGGCACTGAGATGAGTGAGCAAGGGAAGAGTTAATAGGCCTTTGGTCAGTGTTTTTTG
CATTCTCATTCGATGAGCAAGACATTGGACCAACAGCCAATGAGATGTAAACCCATAAGA
AAAGTCCTAGGGTATAGAGTTTTTCCCTCTATGGAAGCAAGGTGAAGAAATATAGTGGTG
CCAGATGAGGAAGGCTGCTTTTGGGAGATTTGAAAAGTACATTCCTGCCTTATCAGCAAA
TGTGGCAGATAGGCTTTAAGTCAATCTCAGTACACTGTGCTGTCTATGCTTTGATAAAGA
CAGTGTTCCAGTGAGAATGTGAGAGAGGAAGGGAACCGCACTTTGCTTCACCATCAGAAC
TCTGAGCCGAGTAATGAAATATTTAAACTATTTTATGATTATTTTAAATTTTTGTTTGTA
ACACTTAGAGGGTATATTTTTATTTGGGGATAGACTAAGAAGCCACCATTTACATAAACA
AGTGAGTTGAACTTGAGGCGCCTGTGTAGATTTATTAAATGGCTGCCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-708, gnl|bosTau2|chr1 (41149794-41150472)
               

               
               1-708, gnl|Hg17|chr3 (120619495-120620233)
               

               
               1-708, gnl|Mm7|chr16 (38311011-38310345)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-708, gnl|bosTau2|chr1 (41149794-41150472)
               

               
               1-708, gnl|Hg17|chr3 (120619495-120620233)
               

               
               1-708, gnl|Mm7|chr16 (38311011-38310345)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cmu (0.186393)
               

               
               kid (0.129735)
               

               
               ova (0.129132)
               

               
               sug (0.127291)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)
               

               
               kid (0.129735)
               

               
               ova (0.129132)
               

               
               sug (0.127291)

	1-708, gnl\|bosTau2\|chr1 (41149794-41150472)
	1-708, gnl\|Hg17\|chr3 (120619495-120620233)
	1-708, gnl\|Mm7\|chr16 (38311011-38310345)