Non-Coding RNA Search

Ss1.1-ruio28_f21.5

Sequence:


               
               TAATTTAGTATTCTGGAATTCACATGCTTGAACTATTAATGCCATTTTCTTTCTCCTTTC
TGTAGTAAAATCTTTGGCTTTAAGAAAACTGAGTCAATGTAAACTCTGTAAGGATTACCT
TTTATTACATATATTCTTAGAATTGGCTAGAAAGTCTCATCTGCTCTTTAATTTCAGTGG
ATGTTTGGCATTGAGGAGACACTTAGAGAATATACTGACAGCCATGTGAGTTAACGCTAG
AAAAGTGCCCTTTGACTTCAGATTGCTTTTCCATCCCAAGATGACAAGCTTCAAGTTGTA
GTTGACCCTCATTCTACTGGATTTGAGACCAGTAAGTGCAGTTTAGAGAAACAGTTTGAT
GTTTGCAAATATTCTGATTCTCCAGGATGTTTTCCATGCATACGATATATGCAGGATAAA
TTCTGTAATAGCCAACTCCAAAGGAGTGTTGAAACTCTTCTCAGTGATGGGGTGGTGGTG
TTTGAATACTGTTGAAGTGGACTGTAGAGTCCTATAGAAACGATGTTGATGTGTGACAGG
ATTCAACCTATAAGACAGTATATTTTTCCTCTTTTTTTTTTTTTTTTGGTTTCTTTTAAT
GTATTCTTTAGCATGTTTATAAATATAACTTTTATCCTTCAGCTCTTAAGCCTTCTTTTG
CCGCCTTCACCAATTTAAGAGACTTACAAGTTGTAATGTTTTTAAAAGTTATTTTGGTAT
CCACTCTTAAAAAAATTCTCCAACTTTGTGGTTTTTAATGATTTAGGTAACTTTTGTGCT
CTCTGCCCCTCATCTTCTAAAACCTTTAAATAAAAGGTAATAATTGTGAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATTTAGTATTCTGGAATTCACATGCTTGAACTATTAATGCCATTTTCTTTCTCCTTTC
TGTAGTAAAATCTTTGGCTTTAAGAAAACTGAGTCAATGTAAACTCTGTAAGGATTACCT
TTTATTACATATATTCTTAGAATTGGCTAGAAAGTCTCATCTGCTCTTTAATTTCAGTGG
ATGTTTGGCATTGAGGAGACACTTAGAGAATATACTGACAGCCATGTGAGTTAACGCTAG
AAAAGTGCCCTTTGACTTCAGATTGCTTTTCCATCCCAAGATGACAAGCTTCAAGTTGTA
GTTGACCCTCATTCTACTGGATTTGAGACCAGTAAGTGCAGTTTAGAGAAACAGTTTGAT
GTTTGCAAATATTCTGATTCTCCAGGATGTTTTCCATGCATACGATATATGCAGGATAAA
TTCTGTAATAGCCAACTCCAAAGGAGTGTTGAAACTCTTCTCAGTGATGGGGTGGTGGTG
TTTGAATACTGTTGAAGTGGACTGTAGAGTCCTATAGAAACGATGTTGATGTGTGACAGG
ATTCAACCTATAAGACAGTATATTTTTCCTCTTTTTTTTTTTTTTTTGGTTTCTTTTAAT
GTATTCTTTAGCATGTTTATAAATATAACTTTTATCCTTCAGCTCTTAAGCCTTCTTTTG
CCGCCTTCACCAATTTAAGAGACTTACAAGTTGTAATGTTTTTAAAAGTTATTTTGGTAT
CCACTCTTAAAAAAATTCTCCAACTTTGTGGTTTTTAATGATTTAGGTAACTTTTGTGCT
CTCTGCCCCTCATCTTCTAAAACCTTTAAATAAAAGGTAATAATTGTGAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-691, gnl|bosTau2|chr7 (43933444-43932775)
               

               
               2-691, gnl|Hg17|chr5 (153352341-153351670)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-691, gnl|bosTau2|chr7 (43933444-43932775)
               

               
               2-691, gnl|Hg17|chr5 (153352341-153351670)

Expressed library(ies): 8 entry(ies)

More info

Expressed library(ies): 8 entry(ies)

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               kid (0.648677)
               

               
               mgp (0.461361)
               

               
               amn (0.417711)
               

               
               fcc (0.197785)
               

               
               lin (0.145603)
               

               
               ste (0.135208)
               

               
               spc (0.113366)
               

               
               jej (0.0989218)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.648677)
               

               
               mgp (0.461361)
               

               
               amn (0.417711)
               

               
               fcc (0.197785)
               

               
               lin (0.145603)
               

               
               ste (0.135208)
               

               
               spc (0.113366)
               

               
               jej (0.0989218)

	2-691, gnl\|bosTau2\|chr7 (43933444-43932775)
	2-691, gnl\|Hg17\|chr5 (153352341-153351670)

	kid (0.648677)
	mgp (0.461361)
	amn (0.417711)
	fcc (0.197785)
	lin (0.145603)
	ste (0.135208)
	spc (0.113366)
	jej (0.0989218)