Non-Coding RNA Search

Ss1.1-ruio28_k8.5

Sequence:


               
               GAGCTAGGACTAGGGAAGCTGCTAAACCGTTACCTTATTGTAGCTCTTAACGCCATACCT
GGGCCAGATGTTGTTAAAAAGTGCAACCAAATAGCAGCATATTTACCAGAAGAATGGTTC
CAAAATTCTGCGATGAGAACATCTATTCCCCAGCTAGAAAACTTCATCCAGTTTTTACTG
CAGTCTGCACATAAATTATCTAGAAGTGAAATCAGGGATGAAATCAAAGAAATAATCATT
ATTCTGGTGAAAATAAAGGCTCTAACTCAAGCAGAATCCTTTTTAGAAGAGTATCACCTA
GACCATCTTAAATCAGTAATTAAAGAAGTTTGAGTAAACTTTATAGGAAAATACTGAAAT
AAGATTTTAATGTAGTCACATTTGGCTCTTTTGCTTAGATGTCCACCTTCTGACATCATG
AAAGGCTGCCCCTCCTTATTTTGTGGTGTTTGTAGGAATTAAGCACACAGGAACAGTAAG
AGTTCAACAAATTTCTGTTTGATTCTTCTGACAACTTTTCCAGCTTAAGAAAGGAGTTGA
AGATGGTAACTAAATTTCTAACATTGAGCATGCTGTAAAGTATAAAGAAGTAGAAATACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCTAGGACTAGGGAAGCTGCTAAACCGTTACCTTATTGTAGCTCTTAACGCCATACCT
GGGCCAGATGTTGTTAAAAAGTGCAACCAAATAGCAGCATATTTACCAGAAGAATGGTTC
CAAAATTCTGCGATGAGAACATCTATTCCCCAGCTAGAAAACTTCATCCAGTTTTTACTG
CAGTCTGCACATAAATTATCTAGAAGTGAAATCAGGGATGAAATCAAAGAAATAATCATT
ATTCTGGTGAAAATAAAGGCTCTAACTCAAGCAGAATCCTTTTTAGAAGAGTATCACCTA
GACCATCTTAAATCAGTAATTAAAGAAGTTTGAGTAAACTTTATAGGAAAATACTGAAAT
AAGATTTTAATGTAGTCACATTTGGCTCTTTTGCTTAGATGTCCACCTTCTGACATCATG
AAAGGCTGCCCCTCCTTATTTTGTGGTGTTTGTAGGAATTAAGCACACAGGAACAGTAAG
AGTTCAACAAATTTCTGTTTGATTCTTCTGACAACTTTTCCAGCTTAAGAAAGGAGTTGA
AGATGGTAACTAAATTTCTAACATTGAGCATGCTGTAAAGTATAAAGAAGTAGAAATACA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               212-396, gnl|bosTau2|chr11 (30299726-30299909)
               

               
               212-396, gnl|Hg17|chr2 (75803568-75803389)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               212-396, gnl|bosTau2|chr11 (30299726-30299909)
               

               
               212-396, gnl|Hg17|chr2 (75803568-75803389)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               liv (0.146284)
               

               
               lin (0.145603)
               

               
               ssp (0.13552)
               

               
               kid (0.129735)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               lin (0.145603)
               

               
               ssp (0.13552)
               

               
               kid (0.129735)

	212-396, gnl\|bosTau2\|chr11 (30299726-30299909)
	212-396, gnl\|Hg17\|chr2 (75803568-75803389)