Ss1.1-ruio30_p2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGGTGAAATTTGTAGGGTTAATACCTAACTCTCCACTAAATGATACAGTTTATGAGAGC AGGACTCACGTCTATTTGGCTCATTACTGCATCCTCAACACCTAGCACATAGCTGGGAAC ACAGCAAGTACTGAAATGTTTGTTCAGTGAAGGAAAACGTAATAATCAGTTCTCACTTTT TTCTTTGGAAAGTAGCAGTAATTCACAACTTCCTTCTTTGTAAGAATAGTGGCCTTTTCT AATAAGAGTCACCATAAAATGAAATGGTATGTGTCCTTGCTGATCAAAACTGGATCGCCA AGTATCATTACCACAAGTCTTACCTCATCCTCTGCGGCATCATTAACCTGCTTGCTCCTT TAGCCACCACATTTCCACTACTTATGACCTATACCATCTTCTTTGCCATTTTCTCCGGTG GTTACCTGGCATTGATACTTCCTGTACTGGTTGATCTCTCCGGGAATTTTATGGTACACA GATTTGTGGGTTTTGCCTCTTTCTTTGCTGGGATGGCTGTTCTTTCTGGACCACCTCTGG CAGGCTGGTTACATGATTATACCCAGACATACACTGGCTCCTTCTACCTCTCGGGCGCAT GCTATCTACTCTCTTCAGTGTCCTTTTTCTTTGTGCCACTGGCTGAGCAATGGAGAAACA GAAAGAGAGAGGACTGCAATCAAGTGAGCGCTTAACAAAAGAAAATCTAAACTAATAAGT CACTGAAAACAGAAGCATGGAAGTAAAGTTCCCTCATTTGTAAAATGAGAGTGTAAACCA TTTTGCTTTAGCATTCTGAGGAATGTGTAACTGGCAGGAAATCAGTGAAAACAACTGCTT TAGATATTAATGAAAATCAGAATGTACTATAATAATAAATTAACCAAACTCTCAAAAAAA AAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGGTGAAATTTGTAGGGTTAATACCTAACTCTCCACTAAATGATACAGTTTATGAGAGC AGGACTCACGTCTATTTGGCTCATTACTGCATCCTCAACACCTAGCACATAGCTGGGAAC ACAGCAAGTACTGAAATGTTTGTTCAGTGAAGGAAAACGTAATAATCAGTTCTCACTTTT TTCTTTGGAAAGTAGCAGTAATTCACAACTTCCTTCTTTGTAAGAATAGTGGCCTTTTCT AATAAGAGTCACCATAAAATGAAATGGTATGTGTCCTTGCTGATCAAAACTGGATCGCCA AGTATCATTACCACAAGTCTTACCTCATCCTCTGCGGCATCATTAACCTGCTTGCTCCTT TAGCCACCACATTTCCACTACTTATGACCTATACCATCTTCTTTGCCATTTTCTCCGGTG GTTACCTGGCATTGATACTTCCTGTACTGGTTGATCTCTCCGGGAATTTTATGGTACACA GATTTGTGGGTTTTGCCTCTTTCTTTGCTGGGATGGCTGTTCTTTCTGGACCACCTCTGG CAGGCTGGTTACATGATTATACCCAGACATACACTGGCTCCTTCTACCTCTCGGGCGCAT GCTATCTACTCTCTTCAGTGTCCTTTTTCTTTGTGCCACTGGCTGAGCAATGGAGAAACA GAAAGAGAGAGGACTGCAATCAAGTGAGCGCTTAACAAAAGAAAATCTAAACTAATAAGT CACTGAAAACAGAAGCATGGAAGTAAAGTTCCCTCATTTGTAAAATGAGAGTGTAAACCA TTTTGCTTTAGCATTCTGAGGAATGTGTAACTGGCAGGAAATCAGTGAAAACAACTGCTT TAGATATTAATGAAAATCAGAATGTACTATAATAATAAATTAACCAAACTCTCAAAAAAA AAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 54-228, gnl|bosTau2|chr3 (29677435-29677262) | |
| 54-228, gnl|Hg17|chr1 (110619005-110618807) | |
| 277-451, gnl|bosTau2|chr3 (29687353-29687179) | |
| 277-451, gnl|canFam2|chr6 (44678347-44678095) | |
| 277-451, gnl|danRer3|chr8 (17362672-17362446) | |
| 277-451, gnl|dasNov1|scaffold_73649 (712-963) | |
| 277-451, gnl|echTel1|scaffold_297935 (8454-8235) | |
| 277-451, gnl|fr1|chrUn (41940069-41939817) | |
| 277-451, gnl|galGal2|chr26 (89463-89701) | |
| 277-451, gnl|hg17|chr1 (110631591-110631843) | |
| 277-451, gnl|Hg17|chr1 (110631786-110631612) | |
| 277-451, gnl|loxAfr1|scaffold_2202 (130462-130705) | |
| 277-451, gnl|mm7|chr3 (107121585-107121331) | |
| 277-451, gnl|Mm7|chr3 (107121388-107121562) | |
| 277-451, gnl|monDom2|scaffold_0 (5788493-5788241) | |
| 277-451, gnl|rheMac2|chr1 (113443549-113443801) | |
| 277-451, gnl|rn3|chr2 (202741802-202741548) | |
| 277-451, gnl|tetNig1|chr9 (3039441-3039678) | |
| 542-789, gnl|bosTau2|chr3 (29676977-29676725) | |
| 542-789, gnl|Hg17|chr1 (110618559-110618305) | |
| 542-789, gnl|Mm7|chr3 (107129722-107129962) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 54-228, gnl|bosTau2|chr3 (29677435-29677262) | |
| 54-228, gnl|Hg17|chr1 (110619005-110618807) | |
| 277-451, gnl|bosTau2|chr3 (29687353-29687179) | |
| 277-451, gnl|canFam2|chr6 (44678347-44678095) | |
| 277-451, gnl|danRer3|chr8 (17362672-17362446) | |
| 277-451, gnl|dasNov1|scaffold_73649 (712-963) | |
| 277-451, gnl|echTel1|scaffold_297935 (8454-8235) | |
| 277-451, gnl|fr1|chrUn (41940069-41939817) | |
| 277-451, gnl|galGal2|chr26 (89463-89701) | |
| 277-451, gnl|hg17|chr1 (110631591-110631843) | |
| 277-451, gnl|Hg17|chr1 (110631786-110631612) | |
| 277-451, gnl|loxAfr1|scaffold_2202 (130462-130705) | |
| 277-451, gnl|mm7|chr3 (107121585-107121331) | |
| 277-451, gnl|Mm7|chr3 (107121388-107121562) | |
| 277-451, gnl|monDom2|scaffold_0 (5788493-5788241) | |
| 277-451, gnl|rheMac2|chr1 (113443549-113443801) | |
| 277-451, gnl|rn3|chr2 (202741802-202741548) | |
| 277-451, gnl|tetNig1|chr9 (3039441-3039678) | |
| 542-789, gnl|bosTau2|chr3 (29676977-29676725) | |
| 542-789, gnl|Hg17|chr1 (110618559-110618305) | |
| 542-789, gnl|Mm7|chr3 (107129722-107129962) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| kid (0.389206) |