Non-Coding RNA Search

Ss1.1-ruio33_k9.5

Sequence:


               
               GGGATAAGCCCCGTCTCATCAAGATCAATGACACTGCTGAGACTAGAACTACCAAATGCT
AATGTATATCTAATGTATAGCCCCAGACCAGAATATGGTGATTCCAGGTGTCCGATATAT
CAGGCCCTTCCTTCCTTATGTTGAAATGAAATATAGATTGCCTTTCACTCACATTTTATA
CAGCCACTAGCAGAGGAAAATTTTATGCATAATTTTTCATCACCATCTGTTATTTTCAAC
AGTTACACAGTGTTTGTTGTTCATTTTCCCCAGAGTCCATCACATTTAAATATTAAACTC
ACTTGATGAGGTCAGCAGGTTTTCTAACAAAAAAGTTTTCCTTTATTTTTATTGAGATAT
GTCTTGTGTCTGATTCTTTTAGTAGCATATTATGTTCTTTTATGTCTAAGAACATTCCAT
TAAATTATGCTTCTGTGGTTATTTTTGATGACTAAAATTTTAAAATAAATTCTGCATCAC
TTCTCTGTCAAGGACATTTCTAACCATGAGCCATAAGTTTTATTCTTTGTTTTCTAGAGA
TGCAAAATGGTGAGCCCTGTAATTCCCATAACATCTATTTTATTTAAAATGGCTATGTTC
TTAGAAAAGGTGTTTCATATTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGATAAGCCCCGTCTCATCAAGATCAATGACACTGCTGAGACTAGAACTACCAAATGCT
AATGTATATCTAATGTATAGCCCCAGACCAGAATATGGTGATTCCAGGTGTCCGATATAT
CAGGCCCTTCCTTCCTTATGTTGAAATGAAATATAGATTGCCTTTCACTCACATTTTATA
CAGCCACTAGCAGAGGAAAATTTTATGCATAATTTTTCATCACCATCTGTTATTTTCAAC
AGTTACACAGTGTTTGTTGTTCATTTTCCCCAGAGTCCATCACATTTAAATATTAAACTC
ACTTGATGAGGTCAGCAGGTTTTCTAACAAAAAAGTTTTCCTTTATTTTTATTGAGATAT
GTCTTGTGTCTGATTCTTTTAGTAGCATATTATGTTCTTTTATGTCTAAGAACATTCCAT
TAAATTATGCTTCTGTGGTTATTTTTGATGACTAAAATTTTAAAATAAATTCTGCATCAC
TTCTCTGTCAAGGACATTTCTAACCATGAGCCATAAGTTTTATTCTTTGTTTTCTAGAGA
TGCAAAATGGTGAGCCCTGTAATTCCCATAACATCTATTTTATTTAAAATGGCTATGTTC
TTAGAAAAGGTGTTTCATATTTTG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-624, gnl|bosTau2|chr9 (8830986-8831602)
               

               
               2-624, gnl|Hg17|chr6 (81147668-81148294)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-624, gnl|bosTau2|chr9 (8830986-8831602)
               

               
               2-624, gnl|Hg17|chr6 (81147668-81148294)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               kid (0.129735)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)
               

               
               ldo (0.0970026)

	2-624, gnl\|bosTau2\|chr9 (8830986-8831602)
	2-624, gnl\|Hg17\|chr6 (81147668-81148294)