Non-Coding RNA Search

Ss1.1-ruio34_e2.5

Sequence:


               
               AAAGAAATGAGGATAGTCTAAGAGAAGTATGGGACAACTTTAAATGCACCAACATTTGCA
TTAAAGGAGTGCCAGAAAGAGGAGAGAGAGAGAAAGGGCCAGAGAAAACATCTGAAGAGA
TAACAGCCTAAAACTTGCTGAAAACTTCCCTAACATGGGAAAGGAATCACTCACTCGAAT
CCAGGAAGCACAATGAATACCATATAAATTAAACCCAAGGAGGTACACCCTAAAAGACAT
ATTAATCAAATTGACCAAAATTAAAGACAAAGAGAAAATACTAAAAGCTGCTAGGAAAAA
GCAGTAAAAAACATACACGGGAACTCCAATGTGGTTATCAGCTGATTTTTCAGCAAAATT
CTGCAGGCCAGAAGGGAGTGGTAA------------------------------------
------------CTCTCATTCAGATTTGAAGGAGAAATCAAAAACTTCACAGACAAGCAA
AAGCTCAGAGAATTCAGCACCACCAAACCAACTTTACAATAAATACTAAAAGAACATCTC
TAGGTGGGAAAGAAAAGGCCACAACTAGAAACAAGAAAACTACAAATAAGTAGGCTTACC
AGTGAAGGCAAATATACAGTAAAGGTAGGAAATCATCCATACACAAATATGATACCAAAC
CCAGCAATCGTTAAGAGGAGGGTAAAAATAAAGGATGATGGAGTTACATTTGCAATTATG
AGACCAGCAACTTAAAACAATCATTTATATATACAGACTCCTATACCAAAATATGGTAGC
CACAACCAAAAATCTACAATAAATACACGAATAACAAAAAACAATCCAAACAGAAAACTA
AAGATAGTCATCAAACTACAAGAGAAGAGAACAAGAGAAGGGAAGAAAAAAGACCAACAA
AAACAAATCTAAAACAACTAACAAAATGGCAGTAAGAACATACATAAAATAACTACCTTA
AATGTATATGGACTATATGCTCCAACCAAAAGACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGAAATGAGGATAGTCTAAGAGAAGTATGGGACAACTTTAAATGCACCAACATTTGCA
TTAAAGGAGTGCCAGAAAGAGGAGAGAGAGAGAAAGGGCCAGAGAAAACATCTGAAGAGA
TAACAGCCTAAAACTTGCTGAAAACTTCCCTAACATGGGAAAGGAATCACTCACTCGAAT
CCAGGAAGCACAATGAATACCATATAAATTAAACCCAAGGAGGTACACCCTAAAAGACAT
ATTAATCAAATTGACCAAAATTAAAGACAAAGAGAAAATACTAAAAGCTGCTAGGAAAAA
GCAGTAAAAAACATACACGGGAACTCCAATGTGGTTATCAGCTGATTTTTCAGCAAAATT
CTGCAGGCCAGAAGGGAGTGGTAA------------------------------------
------------CTCTCATTCAGATTTGAAGGAGAAATCAAAAACTTCACAGACAAGCAA
AAGCTCAGAGAATTCAGCACCACCAAACCAACTTTACAATAAATACTAAAAGAACATCTC
TAGGTGGGAAAGAAAAGGCCACAACTAGAAACAAGAAAACTACAAATAAGTAGGCTTACC
AGTGAAGGCAAATATACAGTAAAGGTAGGAAATCATCCATACACAAATATGATACCAAAC
CCAGCAATCGTTAAGAGGAGGGTAAAAATAAAGGATGATGGAGTTACATTTGCAATTATG
AGACCAGCAACTTAAAACAATCATTTATATATACAGACTCCTATACCAAAATATGGTAGC
CACAACCAAAAATCTACAATAAATACACGAATAACAAAAAACAATCCAAACAGAAAACTA
AAGATAGTCATCAAACTACAAGAGAAGAGAACAAGAGAAGGGAAGAAAAAAGACCAACAA
AAACAAATCTAAAACAACTAACAAAATGGCAGTAAGAACATACATAAAATAACTACCTTA
AATGTATATGGACTATATGCTCCAACCAAAAGACAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-286, gnl|bosTau2|chr1 (89809863-89809591)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-286, gnl|bosTau2|chr1 (89809863-89809591)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               kid (0.129735)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)
               

               
               bla (0.124347)