Non-Coding RNA Search

Ss1.1-rute2101b_a7.5

Sequence:


               
               CAGGATGGTCTCGGACATCAACAATGCCTGGGGCTGCCTGGAGCAGGCGGAGAAGGGCTA
TGAGGAGTGGCTGCTGAATGAGATCCGGAGGCTGGAGAGGCTTGACCACCTGGCAGAGAA
GTTCCGGCAGAAGGCCTCCATCCACGAGGCCTGGACGGATGGCAAAGAGGCCATGCTGCG
GCAGAAGGATTACGAGACGGCCACCCTCTCAGAGATCAAGGCCCTGCTCAAGAAGCACGA
GGCCTTCGAGAGCGACCTGGCCGCCCACCAGGACCGCGTGGAGCAGATCGCTGCCATCGC
GCAGGAGCTCAATGAGCTGGACTATTACGACTCACCCAGTGTCAACGCCCGGTGCCAAAA
GATCTGTGACCAGTGGGACAATCTGGGGGCCCTGACCCAGAAGCGGAGGGAAGCTCTGGA
GCGGACAGAGAAACTGCTGGAGACCATTGACCAGCTGTACCTGGAGTACGCCAAGCGGGC
TGCGCCCTTCAACAACTGGATGGAGGGGGCCATGGAGGACCTGCAGGACACCTTCATCGT
GCACACCATCGAGGAAATCCAGGGACTGACCACAGCCCACGAGCAGTTCAAGGCCACCCT
CCCTGATGCCGACAAGGAGCGCCTGGCCATCCTGGGCATTCACAATGAGGTGTCCAAGAT
TGTCCAGACCTACCACGTCAACATGGCGGGCACCAACCCCTACACAACCATCAAGCCTCC
CTGCCCGTGAAGTGACAGTTTACAAAATTATTTTGTGCAAAAAAGAAAGTTACGTTAAAA
AAAGTAAAAAACCAAAAAAACCACATATTTTATTATAGAAAAAAGTATTTTTTTCTCCAC
CAGACTTAAATGGAAAAGAGGAAAAATTAACTATTTGCACCGAAATGTTTTGTTTTGTTG
TGACAGAAAAATAATCAAGAACAATGTTATATCCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGATGGTCTCGGACATCAACAATGCCTGGGGCTGCCTGGAGCAGGCGGAGAAGGGCTA
TGAGGAGTGGCTGCTGAATGAGATCCGGAGGCTGGAGAGGCTTGACCACCTGGCAGAGAA
GTTCCGGCAGAAGGCCTCCATCCACGAGGCCTGGACGGATGGCAAAGAGGCCATGCTGCG
GCAGAAGGATTACGAGACGGCCACCCTCTCAGAGATCAAGGCCCTGCTCAAGAAGCACGA
GGCCTTCGAGAGCGACCTGGCCGCCCACCAGGACCGCGTGGAGCAGATCGCTGCCATCGC
GCAGGAGCTCAATGAGCTGGACTATTACGACTCACCCAGTGTCAACGCCCGGTGCCAAAA
GATCTGTGACCAGTGGGACAATCTGGGGGCCCTGACCCAGAAGCGGAGGGAAGCTCTGGA
GCGGACAGAGAAACTGCTGGAGACCATTGACCAGCTGTACCTGGAGTACGCCAAGCGGGC
TGCGCCCTTCAACAACTGGATGGAGGGGGCCATGGAGGACCTGCAGGACACCTTCATCGT
GCACACCATCGAGGAAATCCAGGGACTGACCACAGCCCACGAGCAGTTCAAGGCCACCCT
CCCTGATGCCGACAAGGAGCGCCTGGCCATCCTGGGCATTCACAATGAGGTGTCCAAGAT
TGTCCAGACCTACCACGTCAACATGGCGGGCACCAACCCCTACACAACCATCAAGCCTCC
CTGCCCGTGAAGTGACAGTTTACAAAATTATTTTGTGCAAAAAAGAAAGTTACGTTAAAA
AAAGTAAAAAACCAAAAAAACCACATATTTTATTATAGAAAAAAGTATTTTTTTCTCCAC
CAGACTTAAATGGAAAAGAGGAAAAATTAACTATTTGCACCGAAATGTTTTGTTTTGTTG
TGACAGAAAAATAATCAAGAACAATGTTATATCCAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               13-165, gnl|bosTau2|chr10 (55172265-55172113)
               

               
               13-165, gnl|Hg17|chr14 (68426757-68426605)
               

               
               13-165, gnl|Mm7|chr12 (78144513-78144361)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-165, gnl|bosTau2|chr10 (55172265-55172113)
               

               
               13-165, gnl|Hg17|chr14 (68426757-68426605)
               

               
               13-165, gnl|Mm7|chr12 (78144513-78144361)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ute (0.132784)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)

	13-165, gnl\|bosTau2\|chr10 (55172265-55172113)
	13-165, gnl\|Hg17\|chr14 (68426757-68426605)
	13-165, gnl\|Mm7\|chr12 (78144513-78144361)