Non-Coding RNA Search

Ss1.1-rute2102b_a24.5

Sequence:


               
               TCACATGGAACTTTCCCTGGAGGAGATGCTGGAGTTAGGGGGTGGAATGCAGGCAGGTCA
CAGAAAGTGTGAGTGGGCGGGTGGAGAGATGAACAAAGCAGCGGCGTTTCTCTGGCTCAG
ACTCCTAAGAATGCTTGACAAGACAAGTGTTTTTTGGAAGAACCTCATCTCACCATAGTT
ACTTTTTTCACTTTTGTTATATATGTATTTATTAGATCATCTAAGTATTGGTACCTTTTA
TTAAAAGGGTCGATGTGGTGTTTTGCTGTTGAGCTGGTTTTTCGTTTCCTATAAATAAGA
TGAGTTGTAGATCTTGGCTTCCTTTGGGAAGTCCATTGACTTCCATACACTATGATATAC
TGTGAACCTATTCTTTTGTTACCTAATAAATCAGCGAACGAACATGCAAACTCTTTGGCA
GAATGTGAACTCAAATTGACACCGAATATGTTACTGGCCATTTTGCAGCAATTAAGAGCA
TAGCACTTTATCTCGATGAAAACTGGATTCCTTATCTTTGAAATATCTTGAACTGTTTCT
CGCTCACAACTTCAATAAGCATGCCAACACTTCACCTGTTCATGCTTGAAGTGAAATGTT
TTATTTTTCACTGGAGAAGACAAAAACAGGGTGATCTTCACATTATTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACATGGAACTTTCCCTGGAGGAGATGCTGGAGTTAGGGGGTGGAATGCAGGCAGGTCA
CAGAAAGTGTGAGTGGGCGGGTGGAGAGATGAACAAAGCAGCGGCGTTTCTCTGGCTCAG
ACTCCTAAGAATGCTTGACAAGACAAGTGTTTTTTGGAAGAACCTCATCTCACCATAGTT
ACTTTTTTCACTTTTGTTATATATGTATTTATTAGATCATCTAAGTATTGGTACCTTTTA
TTAAAAGGGTCGATGTGGTGTTTTGCTGTTGAGCTGGTTTTTCGTTTCCTATAAATAAGA
TGAGTTGTAGATCTTGGCTTCCTTTGGGAAGTCCATTGACTTCCATACACTATGATATAC
TGTGAACCTATTCTTTTGTTACCTAATAAATCAGCGAACGAACATGCAAACTCTTTGGCA
GAATGTGAACTCAAATTGACACCGAATATGTTACTGGCCATTTTGCAGCAATTAAGAGCA
TAGCACTTTATCTCGATGAAAACTGGATTCCTTATCTTTGAAATATCTTGAACTGTTTCT
CGCTCACAACTTCAATAAGCATGCCAACACTTCACCTGTTCATGCTTGAAGTGAAATGTT
TTATTTTTCACTGGAGAAGACAAAAACAGGGTGATCTTCACATTATTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-648, gnl|bosTau2|chr8 (37916237-37915594)
               

               
               6-648, gnl|Hg17|chr4 (53303692-53303082)
               

               
               6-648, gnl|Mm7|chr5 (73419145-73418561)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-648, gnl|bosTau2|chr8 (37916237-37915594)
               

               
               6-648, gnl|Hg17|chr4 (53303692-53303082)
               

               
               6-648, gnl|Mm7|chr5 (73419145-73418561)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ste (0.135208)
               

               
               ute (0.132784)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)
               

               
               ute (0.132784)

	6-648, gnl\|bosTau2\|chr8 (37916237-37915594)
	6-648, gnl\|Hg17\|chr4 (53303692-53303082)
	6-648, gnl\|Mm7\|chr5 (73419145-73418561)