Ss1.1-rute2103b_d16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGGCCTCCACGATGTTGATGAGTATATGCAGGCCCAGCTCCTCCTAGCCGCGCTGAACA TCGCCACACACGTCTTGAAGCCAGGGGGCTGCTTTGTGGCCAAGATCTTCCGAGGCCGGG ATGTGACGCTGATCTACAGCCAGCTGCGTGTCTTCTTCTCCAGCGTGCTCTGTGCCAAGC CCAGGAGCAGCCGGAACTCCAGCATCGAGGCTTTCGCTGTCTGTAAGGGTTATGACCCCC CTGCGGGTTTCCTGCCAGACCTGACCAAACCCCTGCTGGACCACTCTTACGATTTCAACC AATTGGATGGGCCTACCCGCACCATTGTGCCATTTGTGACCTGCGGGGACCTGAGCGCCT ATGATTCGGACCGCAGCTACCCACTGGACCTAGAGGACGGCTCAGAGTACAAGTACACCC CACCCACGCAGCCCCCCATCTCACCACCGTACCAGGAGGCCTGCACATTGAAGAAGAAGG GGCAGCTAGCCAAGGAGACCCGCCCGCAGGACTGCTCCGTCAGCACAGCGGCCGTGTTGC CCCAGTCCCTGGCTGCCCCACAGTGCCACACCCTGCTGGCCTCTGAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGGCCTCCACGATGTTGATGAGTATATGCAGGCCCAGCTCCTCCTAGCCGCGCTGAACA TCGCCACACACGTCTTGAAGCCAGGGGGCTGCTTTGTGGCCAAGATCTTCCGAGGCCGGG ATGTGACGCTGATCTACAGCCAGCTGCGTGTCTTCTTCTCCAGCGTGCTCTGTGCCAAGC CCAGGAGCAGCCGGAACTCCAGCATCGAGGCTTTCGCTGTCTGTAAGGGTTATGACCCCC CTGCGGGTTTCCTGCCAGACCTGACCAAACCCCTGCTGGACCACTCTTACGATTTCAACC AATTGGATGGGCCTACCCGCACCATTGTGCCATTTGTGACCTGCGGGGACCTGAGCGCCT ATGATTCGGACCGCAGCTACCCACTGGACCTAGAGGACGGCTCAGAGTACAAGTACACCC CACCCACGCAGCCCCCCATCTCACCACCGTACCAGGAGGCCTGCACATTGAAGAAGAAGG GGCAGCTAGCCAAGGAGACCCGCCCGCAGGACTGCTCCGTCAGCACAGCGGCCGTGTTGC CCCAGTCCCTGGCTGCCCCACAGTGCCACACCCTGCTGGCCTCTGAGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-375, gnl|bosTau2|chr17 (23615777-23615396) | |
| 1-375, gnl|Hg17|chrX (48095796-48097275) | |
| 1-375, gnl|Mm7|chrX (6680068-6678586) | |
| 103-205, gnl|bosTau2|chr14 (5487203-5487305) | |
| 103-205, gnl|canFam2|chrX (41680613-41680729) | |
| 103-205, gnl|danRer3|chrUn (66665778-66665662) | |
| 103-205, gnl|dasNov1|scaffold_13952 (4908-4999) | |
| 103-205, gnl|echTel1|scaffold_230829 (9438-9319) | |
| 103-205, gnl|fr1|chrUn (111036580-111036689) | |
| 103-205, gnl|hg17|chrX (48096066-48096182) | |
| 103-205, gnl|Hg17|chrX (48096066-48096168) | |
| 103-205, gnl|loxAfr1|scaffold_1731 (138891-138994) | |
| 103-205, gnl|mm7|chrX (6679788-6679666) | |
| 103-205, gnl|Mm7|chrX (6679786-6679684) | |
| 103-205, gnl|oryCun1|scaffold_130473 (9170-9273) | |
| 103-205, gnl|rheMac2|chrX (46331806-46331922) | |
| 103-205, gnl|rn3|chrX (26333661-26333779) | |
| 103-205, gnl|tetNig1|chrUn_random (25925972-25925865) | |
| 103-205, gnl|xenTro1|scaffold_1935 (2391-2275) | |
| 384-588, gnl|bosTau2|chr14 (5488369-5488573) | |
| 384-588, gnl|Hg17|chrX (48097233-48097437) | |
| 384-588, gnl|Mm7|chrX (6678627-6678433) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-375, gnl|bosTau2|chr17 (23615777-23615396) | |
| 1-375, gnl|Hg17|chrX (48095796-48097275) | |
| 1-375, gnl|Mm7|chrX (6680068-6678586) | |
| 103-205, gnl|bosTau2|chr14 (5487203-5487305) | |
| 103-205, gnl|canFam2|chrX (41680613-41680729) | |
| 103-205, gnl|danRer3|chrUn (66665778-66665662) | |
| 103-205, gnl|dasNov1|scaffold_13952 (4908-4999) | |
| 103-205, gnl|echTel1|scaffold_230829 (9438-9319) | |
| 103-205, gnl|fr1|chrUn (111036580-111036689) | |
| 103-205, gnl|hg17|chrX (48096066-48096182) | |
| 103-205, gnl|Hg17|chrX (48096066-48096168) | |
| 103-205, gnl|loxAfr1|scaffold_1731 (138891-138994) | |
| 103-205, gnl|mm7|chrX (6679788-6679666) | |
| 103-205, gnl|Mm7|chrX (6679786-6679684) | |
| 103-205, gnl|oryCun1|scaffold_130473 (9170-9273) | |
| 103-205, gnl|rheMac2|chrX (46331806-46331922) | |
| 103-205, gnl|rn3|chrX (26333661-26333779) | |
| 103-205, gnl|tetNig1|chrUn_random (25925972-25925865) | |
| 103-205, gnl|xenTro1|scaffold_1935 (2391-2275) | |
| 384-588, gnl|bosTau2|chr14 (5488369-5488573) | |
| 384-588, gnl|Hg17|chrX (48097233-48097437) | |
| 384-588, gnl|Mm7|chrX (6678627-6678433) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| eli (0.151814) | |
| nmm (0.132802) | |
| ute (0.132784) | |
| eru (0.120048) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eli (0.151814) | |
| nmm (0.132802) | |
| ute (0.132784) | |
| eru (0.120048) |