Non-Coding RNA Search

Ss1.1-rute2103b_o13.5

Sequence:


               
               GAATTTATGTAACACACTGCTGGCACATAGTGCCATTTAAATGCTAATTGTTGCTGTTGT
TGTTATTATTTTTTTATTACTACAGTGTCTCGAAGGACAACTACCCCAATTATCCCCCTT
CAGTCACCCTTGCACTGTGCCCTTTTATTCTTACATATAGATTTTGATGACAACAAAACT
GAGTTTCTTTAATCTGGTTCTAATGGTAGCTTACATCTTAGAAAGCAAGGACAAAGTTAA
TTGAATATGGCTGGTATCAATCCAGGTAATGATGAAGATTTAAATGATGCTTTTTGAGGA
TAATTATGAAGATGACAATGATGATGATGATGAAAATATGACCAGATGCTCCTCTGGGTT
AATACTCTTTGCTTACACAGCTAAGTTTCCGGGAAACATATAATATTTCCCCTGAAATTA
GGTTTTTTTTTCCCATTACGTGGAGGCATGATCTGTGTAAGAAAATATATTGTGCAGTAT
GTGTGAGATTTATTTCTCAGAAAGCAAAGAAATGGTGAGAATTTTAAGTGTTCTACATAC
TTATTTAGATCTCACATCAGGAGATAAAACAAATGAAAACTCTGCCTTGTTAATAATTTA
CATTTTAGTGGAAAATTCGTACATGCTGTTAAGATATCTCTAAGACCCAACACAAAAAAT
GCAAATAACTTAACATCCACTGTGCAATGAAGACAGAATTTGTCTGAGAAGAAAACACCA
TCAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATTTATGTAACACACTGCTGGCACATAGTGCCATTTAAATGCTAATTGTTGCTGTTGT
TGTTATTATTTTTTTATTACTACAGTGTCTCGAAGGACAACTACCCCAATTATCCCCCTT
CAGTCACCCTTGCACTGTGCCCTTTTATTCTTACATATAGATTTTGATGACAACAAAACT
GAGTTTCTTTAATCTGGTTCTAATGGTAGCTTACATCTTAGAAAGCAAGGACAAAGTTAA
TTGAATATGGCTGGTATCAATCCAGGTAATGATGAAGATTTAAATGATGCTTTTTGAGGA
TAATTATGAAGATGACAATGATGATGATGATGAAAATATGACCAGATGCTCCTCTGGGTT
AATACTCTTTGCTTACACAGCTAAGTTTCCGGGAAACATATAATATTTCCCCTGAAATTA
GGTTTTTTTTTCCCATTACGTGGAGGCATGATCTGTGTAAGAAAATATATTGTGCAGTAT
GTGTGAGATTTATTTCTCAGAAAGCAAAGAAATGGTGAGAATTTTAAGTGTTCTACATAC
TTATTTAGATCTCACATCAGGAGATAAAACAAATGAAAACTCTGCCTTGTTAATAATTTA
CATTTTAGTGGAAAATTCGTACATGCTGTTAAGATATCTCTAAGACCCAACACAAAAAAT
GCAAATAACTTAACATCCACTGTGCAATGAAGACAGAATTTGTCTGAGAAGAAAACACCA
TCAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               63-740, gnl|bosTau2|chr2 (35586199-35585538)
               

               
               63-740, gnl|Hg17|chr2 (145063793-145063091)
               

               
               63-740, gnl|Mm7|chr2 (45072146-45071440)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               63-740, gnl|bosTau2|chr2 (35586199-35585538)
               

               
               63-740, gnl|Hg17|chr2 (145063793-145063091)
               

               
               63-740, gnl|Mm7|chr2 (45072146-45071440)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ute (0.132784)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)

	63-740, gnl\|bosTau2\|chr2 (35586199-35585538)
	63-740, gnl\|Hg17\|chr2 (145063793-145063091)
	63-740, gnl\|Mm7\|chr2 (45072146-45071440)