Ss1.1-rute2105b_i23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGGCCTCCATAACCAAGAGCTGGCTGGCTCCAGATGCCAGCAGTGCCCAGGCTGAGAAA CTCTGTCTTCAGTTCTTACACTTCAACTATTTGGAGACAGTGCCCAGGTCCTCTTGGCTC ATCTCTCTATTTTACAGACCAGATGTGCTCAGGTATTTCAGCTGTGCTTTATACGACACT GGTTTTACAGCCTTCTGCTCCCTGTCTCCTCCCACCTGCCTGGGTACAGGATCTGGGAGA ACTCAAGTCGTGTTTTCTTCGCAGATTGATGGGACATTTAAAATCGACATTCCTCCAGTT CTTCTGGGCTATAGCAAGGAGCGGAGTGTGACGGCAGATCGGGGCTTTGATCCCGTCCGA AGCCTGAGTGAAGGCTCCTACCTCACCCTGTTTATTACCTTGGAGCCGCAGCTGGTTCCC GGGGAGTCGGTTCGAGAAAAGGTACTGGTGAACTCTGGAATCACGTGTCTTCAAGCGGCA GAGAAGTTTCAAGCTGAATGTGCCTTAAAGTTTCCAAATCGTCAGTGCCTGACAACAGTG ATTGACATTAGTGGGAAAACGGTCTTTATTACCCGTTATCTCAAGCCTTTGAACCCTCCT CAGGAGCTCCTTGGCGCCTACCCCAACAACCCCCAGGCAACAGCTGAACTCGTGGCTCGA TACGTGTCTTTGATCCCTTTCTTGCCTGACACTGTCTCATTTGCCGGGATCTGTGACCTG TGGAGCACATCTGATCAATTTCTTGATCTCCTGGCAGGAGATGAAGAAGAGCACGCAGTA TTACTATGTAATTATTTTCTCTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGGCCTCCATAACCAAGAGCTGGCTGGCTCCAGATGCCAGCAGTGCCCAGGCTGAGAAA CTCTGTCTTCAGTTCTTACACTTCAACTATTTGGAGACAGTGCCCAGGTCCTCTTGGCTC ATCTCTCTATTTTACAGACCAGATGTGCTCAGGTATTTCAGCTGTGCTTTATACGACACT GGTTTTACAGCCTTCTGCTCCCTGTCTCCTCCCACCTGCCTGGGTACAGGATCTGGGAGA ACTCAAGTCGTGTTTTCTTCGCAGATTGATGGGACATTTAAAATCGACATTCCTCCAGTT CTTCTGGGCTATAGCAAGGAGCGGAGTGTGACGGCAGATCGGGGCTTTGATCCCGTCCGA AGCCTGAGTGAAGGCTCCTACCTCACCCTGTTTATTACCTTGGAGCCGCAGCTGGTTCCC GGGGAGTCGGTTCGAGAAAAGGTACTGGTGAACTCTGGAATCACGTGTCTTCAAGCGGCA GAGAAGTTTCAAGCTGAATGTGCCTTAAAGTTTCCAAATCGTCAGTGCCTGACAACAGTG ATTGACATTAGTGGGAAAACGGTCTTTATTACCCGTTATCTCAAGCCTTTGAACCCTCCT CAGGAGCTCCTTGGCGCCTACCCCAACAACCCCCAGGCAACAGCTGAACTCGTGGCTCGA TACGTGTCTTTGATCCCTTTCTTGCCTGACACTGTCTCATTTGCCGGGATCTGTGACCTG TGGAGCACATCTGATCAATTTCTTGATCTCCTGGCAGGAGATGAAGAAGAGCACGCAGTA TTACTATGTAATTATTTTCTCTCC |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 246-462, gnl|bosTau2|chr6 (62766968-62766750) | |
| 246-462, gnl|Hg17|chr4 (15252023-15252241) | |
| 246-462, gnl|Mm7|chr5 (43046736-43046954) | |
| 469-644, gnl|bosTau2|chr6 (62761692-62761517) | |
| 469-644, gnl|canFam2|chr3 (67583888-67583685) | |
| 469-644, gnl|danRer3|chr7 (4533187-4532975) | |
| 469-644, gnl|dasNov1|scaffold_4432 (57024-57229) | |
| 469-644, gnl|fr1|chrUn (37739154-37738948) | |
| 469-644, gnl|galGal2|chr4 (77009631-77009427) | |
| 469-644, gnl|hg17|chr4 (15257836-15258041) | |
| 469-644, gnl|Hg17|chr4 (15257887-15258062) | |
| 469-644, gnl|loxAfr1|scaffold_2913 (35496-35291) | |
| 469-644, gnl|mm7|chr5 (43050396-43050597) | |
| 469-644, gnl|Mm7|chr5 (43050443-43050618) | |
| 469-644, gnl|monDom2|scaffold_10 (24416435-24416234) | |
| 469-644, gnl|oryCun1|scaffold_202988 (64261-64056) | |
| 469-644, gnl|panTro1|chr3 (15561997-15562202) | |
| 469-644, gnl|rheMac2|chr5 (10376090-10376295) | |
| 469-644, gnl|rn3|chr14 (72530456-72530251) | |
| 469-644, gnl|tetNig1|chr1_random (1688129-1688319) | |
| 469-644, gnl|xenTro1|scaffold_158 (278727-278936) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 246-462, gnl|bosTau2|chr6 (62766968-62766750) | |
| 246-462, gnl|Hg17|chr4 (15252023-15252241) | |
| 246-462, gnl|Mm7|chr5 (43046736-43046954) | |
| 469-644, gnl|bosTau2|chr6 (62761692-62761517) | |
| 469-644, gnl|canFam2|chr3 (67583888-67583685) | |
| 469-644, gnl|danRer3|chr7 (4533187-4532975) | |
| 469-644, gnl|dasNov1|scaffold_4432 (57024-57229) | |
| 469-644, gnl|fr1|chrUn (37739154-37738948) | |
| 469-644, gnl|galGal2|chr4 (77009631-77009427) | |
| 469-644, gnl|hg17|chr4 (15257836-15258041) | |
| 469-644, gnl|Hg17|chr4 (15257887-15258062) | |
| 469-644, gnl|loxAfr1|scaffold_2913 (35496-35291) | |
| 469-644, gnl|mm7|chr5 (43050396-43050597) | |
| 469-644, gnl|Mm7|chr5 (43050443-43050618) | |
| 469-644, gnl|monDom2|scaffold_10 (24416435-24416234) | |
| 469-644, gnl|oryCun1|scaffold_202988 (64261-64056) | |
| 469-644, gnl|panTro1|chr3 (15561997-15562202) | |
| 469-644, gnl|rheMac2|chr5 (10376090-10376295) | |
| 469-644, gnl|rn3|chr14 (72530456-72530251) | |
| 469-644, gnl|tetNig1|chr1_random (1688129-1688319) | |
| 469-644, gnl|xenTro1|scaffold_158 (278727-278936) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| liv (0.146284) | |
| ute (0.132784) | |
| pgl (0.118483) |