Non-Coding RNA Search

Ss1.1-rute2106b_m8.5

Sequence:


               
               GCGGACGCGTGGGTGAAGATGTTAATTTATTTAGAAGCCCCTTCCCTCCCACCAAAGCCC
CCTATGCTTTTGTATTTTTGGGGTCACGTGCCTGATGTGTGGGTGTGTGTGCGTGCACAC
GCGTGCGCGCCTGTGTATGTGTGTGTGTGTGTGAGGAGAACTGAATTGCAGGTTGTTACA
AGCGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATAGCAA
GCTAACTGGAATATCGTAGACGATACCCTGGATGGTCCCTTTCGCGGTTGTACATATTTC
TTTCTCGAGAACTCTAATGCCTTTCGTTGGACACTAGGGATTTGAAACCTGTGAACCAGT
TAAGCGATCATTCGTGTGCCCTGAAAAGGATGAATTCTTTGACCTGGGTTTCATCGGAGT
GGAATTTGTCCTTACCGTGGATTGTCGCGTGGCACTGGGAGCTCTAAAAACTGTGACACA
AACAGTGAAACCGAGGGAAAACTGTCGCTTCCTGCACTTTGGCCCCATCTACCAGTCCTT
GTAAAGGGCACTATTTTAACACTAATGTTTCTCAGGTATATCCTCGGCTAGGCTAGGATG
GGTGTGAACAGTCAAAGAAGGTGGCCTGCGGGTGGCTGTCGTTTCTCCTACTGCCACAGG
TACACGTTTTCGGAGGTAGAAACAAAGTCTTTCACTACCTTCATAGCCGCCAAGATGTGT
GTATCGTAAGTTGTGTTGACCTTGGGATATGTCCCAAAAGAGGTGGCCAACTGGATAGCC
AGAAAGCAAGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGACGCGTGGGTGAAGATGTTAATTTATTTAGAAGCCCCTTCCCTCCCACCAAAGCCC
CCTATGCTTTTGTATTTTTGGGGTCACGTGCCTGATGTGTGGGTGTGTGTGCGTGCACAC
GCGTGCGCGCCTGTGTATGTGTGTGTGTGTGTGAGGAGAACTGAATTGCAGGTTGTTACA
AGCGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATAGCAA
GCTAACTGGAATATCGTAGACGATACCCTGGATGGTCCCTTTCGCGGTTGTACATATTTC
TTTCTCGAGAACTCTAATGCCTTTCGTTGGACACTAGGGATTTGAAACCTGTGAACCAGT
TAAGCGATCATTCGTGTGCCCTGAAAAGGATGAATTCTTTGACCTGGGTTTCATCGGAGT
GGAATTTGTCCTTACCGTGGATTGTCGCGTGGCACTGGGAGCTCTAAAAACTGTGACACA
AACAGTGAAACCGAGGGAAAACTGTCGCTTCCTGCACTTTGGCCCCATCTACCAGTCCTT
GTAAAGGGCACTATTTTAACACTAATGTTTCTCAGGTATATCCTCGGCTAGGCTAGGATG
GGTGTGAACAGTCAAAGAAGGTGGCCTGCGGGTGGCTGTCGTTTCTCCTACTGCCACAGG
TACACGTTTTCGGAGGTAGAAACAAAGTCTTTCACTACCTTCATAGCCGCCAAGATGTGT
GTATCGTAAGTTGTGTTGACCTTGGGATATGTCCCAAAAGAGGTGGCCAACTGGATAGCC
AGAAAGCAAGTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               13-792, gnl|bosTau2|chr25 (19045252-19044457)
               

               
               13-792, gnl|Hg17|chr16 (22986840-22986068)
               

               
               13-792, gnl|Mm7|chr7 (117570440-117569687)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-792, gnl|bosTau2|chr25 (19045252-19044457)
               

               
               13-792, gnl|Hg17|chr16 (22986840-22986068)
               

               
               13-792, gnl|Mm7|chr7 (117570440-117569687)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ute (0.132784)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)

	13-792, gnl\|bosTau2\|chr25 (19045252-19044457)
	13-792, gnl\|Hg17\|chr16 (22986840-22986068)
	13-792, gnl\|Mm7\|chr7 (117570440-117569687)