Non-Coding RNA Search

Ss1.1-rute2110b_f4.5

Sequence:


               
               GACAAAGATGCCCAGTTTTACTGTGAGCTCAGCTACCGGCTGCCCAGTGGGAACCACATG
AAGGAGTCTCCGGAGGTCATGGTCCCCGTTTTCTACCCGGCGGAGAGAGTGTGGTTGGAA
GTGGAGCCTGAGGGAATGCTGAAGGAGGGGGACCGCGTGGAAATCAGGTGTCTGGCTGAT
GGCAATCCCCCACCCCACTTCAGCATCAGCAAGCAGAACCTCAGCACCAAGGAGATGGAG
GAAGAAAGTACCGATGACAACGGGATCCTGGTCCTGGAGCCCGCCCAGAAGGAGCATAGC
GGGCTCTACGAATGTCAGGGCTTGGACTTGGAGACCACAGTATCGCTGCTGAGCGACCAA
CAGGAGCTGCTGGTGAACTATGTGTCCGATGTCCGGGTGAGCCCCGCAGCCCCCGAGAGC
CAGGAGGGCAGCAGCCTCACCCTGACCTGTGAGGCAGAGAGTAACCAGGACCTTGAGTTC
CAGTGGCTGAGAGAAAAGACAGGCAAGGTGCTGGAAAGGGGGCCTGTGCTCCAATTACGT
AACCTGAAGCGGGAGGAAGGAGGAGGCTACCGCTGCGTGGCATCTGCACCCAGTGTACCT
GGCCTGAACCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACAAAGATGCCCAGTTTTACTGTGAGCTCAGCTACCGGCTGCCCAGTGGGAACCACATG
AAGGAGTCTCCGGAGGTCATGGTCCCCGTTTTCTACCCGGCGGAGAGAGTGTGGTTGGAA
GTGGAGCCTGAGGGAATGCTGAAGGAGGGGGACCGCGTGGAAATCAGGTGTCTGGCTGAT
GGCAATCCCCCACCCCACTTCAGCATCAGCAAGCAGAACCTCAGCACCAAGGAGATGGAG
GAAGAAAGTACCGATGACAACGGGATCCTGGTCCTGGAGCCCGCCCAGAAGGAGCATAGC
GGGCTCTACGAATGTCAGGGCTTGGACTTGGAGACCACAGTATCGCTGCTGAGCGACCAA
CAGGAGCTGCTGGTGAACTATGTGTCCGATGTCCGGGTGAGCCCCGCAGCCCCCGAGAGC
CAGGAGGGCAGCAGCCTCACCCTGACCTGTGAGGCAGAGAGTAACCAGGACCTTGAGTTC
CAGTGGCTGAGAGAAAAGACAGGCAAGGTGCTGGAAAGGGGGCCTGTGCTCCAATTACGT
AACCTGAAGCGGGAGGAAGGAGGAGGCTACCGCTGCGTGGCATCTGCACCCAGTGTACCT
GGCCTGAACCGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               214-382, gnl|bosTau2|chr15 (14394828-14394660)
               

               
               214-382, gnl|Hg17|chr11 (118688351-118688183)
               

               
               214-382, gnl|Mm7|chr9 (44073741-44073910)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               214-382, gnl|bosTau2|chr15 (14394828-14394660)
               

               
               214-382, gnl|Hg17|chr11 (118688351-118688183)
               

               
               214-382, gnl|Mm7|chr9 (44073741-44073910)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ute (0.132784)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)
               

               
               cty (0.10408)

	214-382, gnl\|bosTau2\|chr15 (14394828-14394660)
	214-382, gnl\|Hg17\|chr11 (118688351-118688183)
	214-382, gnl\|Mm7\|chr9 (44073741-44073910)