Ss1.1-rute2110b_h12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTTACTCTTTCTCTTCCTTTCTTTTGCTGAAGTGCGTCTTCAATAGCTACGTGAGAATG GGTGTCTGGGAGGAGAATATCCAGACCACAAAAGTAAAGCCATTTGCCAATGAAGAAGAG TATAAGAAAACTGAAGCAATTGTCCAAAAATTTCAAAATGGTATTGGAGAAAAATTGCAG AAGAAATTACTCGAAAGGGCAAAAGGGAAACGAAATTGGTTGGAAGAGTGGTGGCTGAAT GTTGCCTACCTGGATGTTCGTACACCGTCACAACTGAATGTCAACTTTGCGGGTCCTGCG CCCCATATTGAAAACTACTGGCCTCCAAAGGAAGGCACTCAACTGGAAAGAGGAAGTATA TGTCTTTGGCATGTCTTGAACTACTGGCAGCTATTAAGAAAAGAAAAAATACCTGTCCAA AAAGTTGGAAATACTCCTCTAGATATGTATCAATTCCGGATGCTGTTTGCCACCTGCAAG GTTCCAGGAATCACTAGAGATTCAGTTATGAATTATTTTAGGACTGAGAGTGAAGGGTAT TGTCCAACTCACGTTGCTGTGCTGTGTCGAGGTCGAGTTTTTATCTTCGATGTAATGCAC AAAGGATGTTTGGTCACCCCACCAGAGATTCTCAGGCAGTTGACATTTGTCCAAAAGAAG TGCCACAGTGAACCCGATGGACCAGGAATAGCAGCGCTAACTAGCGAGGAGCGAACTCGA TGGGCTAAGGCACGAGAGTATTTGATTAGACTTAATCCAGAGAACTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTTACTCTTTCTCTTCCTTTCTTTTGCTGAAGTGCGTCTTCAATAGCTACGTGAGAATG GGTGTCTGGGAGGAGAATATCCAGACCACAAAAGTAAAGCCATTTGCCAATGAAGAAGAG TATAAGAAAACTGAAGCAATTGTCCAAAAATTTCAAAATGGTATTGGAGAAAAATTGCAG AAGAAATTACTCGAAAGGGCAAAAGGGAAACGAAATTGGTTGGAAGAGTGGTGGCTGAAT GTTGCCTACCTGGATGTTCGTACACCGTCACAACTGAATGTCAACTTTGCGGGTCCTGCG CCCCATATTGAAAACTACTGGCCTCCAAAGGAAGGCACTCAACTGGAAAGAGGAAGTATA TGTCTTTGGCATGTCTTGAACTACTGGCAGCTATTAAGAAAAGAAAAAATACCTGTCCAA AAAGTTGGAAATACTCCTCTAGATATGTATCAATTCCGGATGCTGTTTGCCACCTGCAAG GTTCCAGGAATCACTAGAGATTCAGTTATGAATTATTTTAGGACTGAGAGTGAAGGGTAT TGTCCAACTCACGTTGCTGTGCTGTGTCGAGGTCGAGTTTTTATCTTCGATGTAATGCAC AAAGGATGTTTGGTCACCCCACCAGAGATTCTCAGGCAGTTGACATTTGTCCAAAAGAAG TGCCACAGTGAACCCGATGGACCAGGAATAGCAGCGCTAACTAGCGAGGAGCGAACTCGA TGGGCTAAGGCACGAGAGTATTTGATTAGACTTAATCCAGAGAACTTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 216-401, gnl|bosTau2|chr4 (12761302-12761117) | |
| 216-401, gnl|canFam2|chr14 (16433924-16434160) | |
| 216-401, gnl|danRer3|chrUn (26844912-26844683) | |
| 216-401, gnl|dasNov1|scaffold_276346 (591-359) | |
| 216-401, gnl|echTel1|scaffold_233201 (12500-12735) | |
| 216-401, gnl|fr1|chrUn (62348124-62348325) | |
| 216-401, gnl|galGal2|chr2 (19954081-19954352) | |
| 216-401, gnl|hg17|chr7 (86635335-86635569) | |
| 216-401, gnl|Hg17|chr7 (86635353-86635538) | |
| 216-401, gnl|loxAfr1|scaffold_180911 (878-665) | |
| 216-401, gnl|mm7|chr5 (9025949-9025667) | |
| 216-401, gnl|Mm7|chr5 (9025933-9025748) | |
| 216-401, gnl|monDom2|scaffold_7 (54978081-54978311) | |
| 216-401, gnl|oryCun1|scaffold_173139 (75497-75265) | |
| 216-401, gnl|panTro1|chr6 (88143701-88143935) | |
| 216-401, gnl|rheMac2|chr3 (129897388-129897154) | |
| 216-401, gnl|rn3|chr4 (22047268-22046986) | |
| 216-401, gnl|tetNig1|chr8 (7525210-7525404) | |
| 216-401, gnl|xenTro1|scaffold_188 (1820227-1820010) | |
| 402-526, gnl|bosTau2|chr4 (12760948-12760824) | |
| 402-526, gnl|canFam2|chr14 (16434236-16434422) | |
| 402-526, gnl|danRer3|chrUn (26840748-26840564) | |
| 402-526, gnl|dasNov1|scaffold_36337 (7021-6849) | |
| 402-526, gnl|echTel1|scaffold_233201 (12944-13127) | |
| 402-526, gnl|fr1|chrUn (62348381-62348542) | |
| 402-526, gnl|galGal2|chr2 (19954433-19954617) | |
| 402-526, gnl|hg17|chr7 (86635646-86635825) | |
| 402-526, gnl|Hg17|chr7 (86635695-86635819) | |
| 402-526, gnl|loxAfr1|scaffold_180911 (584-401) | |
| 402-526, gnl|mm7|chr5 (9025590-9025408) | |
| 402-526, gnl|Mm7|chr5 (9025536-9025412) | |
| 402-526, gnl|monDom2|scaffold_7 (54978391-54978572) | |
| 402-526, gnl|oryCun1|scaffold_173139 (75188-75009) | |
| 402-526, gnl|panTro1|chr6 (88144012-88144191) | |
| 402-526, gnl|rheMac2|chr3 (129897077-129896896) | |
| 402-526, gnl|rn3|chr4 (22046920-22046749) | |
| 402-526, gnl|tetNig1|chr8 (7525428-7525588) | |
| 402-526, gnl|xenTro1|scaffold_188 (1819229-1819049) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 216-401, gnl|bosTau2|chr4 (12761302-12761117) | |
| 216-401, gnl|canFam2|chr14 (16433924-16434160) | |
| 216-401, gnl|danRer3|chrUn (26844912-26844683) | |
| 216-401, gnl|dasNov1|scaffold_276346 (591-359) | |
| 216-401, gnl|echTel1|scaffold_233201 (12500-12735) | |
| 216-401, gnl|fr1|chrUn (62348124-62348325) | |
| 216-401, gnl|galGal2|chr2 (19954081-19954352) | |
| 216-401, gnl|hg17|chr7 (86635335-86635569) | |
| 216-401, gnl|Hg17|chr7 (86635353-86635538) | |
| 216-401, gnl|loxAfr1|scaffold_180911 (878-665) | |
| 216-401, gnl|mm7|chr5 (9025949-9025667) | |
| 216-401, gnl|Mm7|chr5 (9025933-9025748) | |
| 216-401, gnl|monDom2|scaffold_7 (54978081-54978311) | |
| 216-401, gnl|oryCun1|scaffold_173139 (75497-75265) | |
| 216-401, gnl|panTro1|chr6 (88143701-88143935) | |
| 216-401, gnl|rheMac2|chr3 (129897388-129897154) | |
| 216-401, gnl|rn3|chr4 (22047268-22046986) | |
| 216-401, gnl|tetNig1|chr8 (7525210-7525404) | |
| 216-401, gnl|xenTro1|scaffold_188 (1820227-1820010) | |
| 402-526, gnl|bosTau2|chr4 (12760948-12760824) | |
| 402-526, gnl|canFam2|chr14 (16434236-16434422) | |
| 402-526, gnl|danRer3|chrUn (26840748-26840564) | |
| 402-526, gnl|dasNov1|scaffold_36337 (7021-6849) | |
| 402-526, gnl|echTel1|scaffold_233201 (12944-13127) | |
| 402-526, gnl|fr1|chrUn (62348381-62348542) | |
| 402-526, gnl|galGal2|chr2 (19954433-19954617) | |
| 402-526, gnl|hg17|chr7 (86635646-86635825) | |
| 402-526, gnl|Hg17|chr7 (86635695-86635819) | |
| 402-526, gnl|loxAfr1|scaffold_180911 (584-401) | |
| 402-526, gnl|mm7|chr5 (9025590-9025408) | |
| 402-526, gnl|Mm7|chr5 (9025536-9025412) | |
| 402-526, gnl|monDom2|scaffold_7 (54978391-54978572) | |
| 402-526, gnl|oryCun1|scaffold_173139 (75188-75009) | |
| 402-526, gnl|panTro1|chr6 (88144012-88144191) | |
| 402-526, gnl|rheMac2|chr3 (129897077-129896896) | |
| 402-526, gnl|rn3|chr4 (22046920-22046749) | |
| 402-526, gnl|tetNig1|chr8 (7525428-7525588) | |
| 402-526, gnl|xenTro1|scaffold_188 (1819229-1819049) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.265569) | |
| pty (0.142714) |