Non-Coding RNA Search

Ss1.1-rute2110b_k19.5

Sequence:


               
               TGGAGGCTGTATTCATTTAAAGGTGGGAAACTTTTTGTGCAGTTCCTAGAAACACCTGCT
TTTTCTAGAAAGAACCTTTTCTATGATAGGTTATGATTGTGTTTTCTCTAAGAGCTTTTA
TTTCAGTTTCACTTTTCAAGTTAACAAATGCTATGTAAAGTCTCTCATACTGAGAGTAGT
CCATTAAATTATTGAAAGTTGCACTGCTGTTGATCTTTCAGGTGCCTGAAGTGAATGTCA
TCAGGTGTTTGGAAGAAGTAAGATCAGAAACTTTATTCATTTTCTTCCGTATACGAAGTG
ATGGCTTCTGATGCTTATATTTCAAGATATTTTTTTAAAAGACAACTGTCCCTATTAGAG
CAAAATTTAATTTCAGCGCAGGTCCCAGTAATATGTTTGATTTCTCTGTTATTGCTGGTG
CCTCATGTTGCATCAGATAGAGATTGCCTGCCTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGAGGCTGTATTCATTTAAAGGTGGGAAACTTTTTGTGCAGTTCCTAGAAACACCTGCT
TTTTCTAGAAAGAACCTTTTCTATGATAGGTTATGATTGTGTTTTCTCTAAGAGCTTTTA
TTTCAGTTTCACTTTTCAAGTTAACAAATGCTATGTAAAGTCTCTCATACTGAGAGTAGT
CCATTAAATTATTGAAAGTTGCACTGCTGTTGATCTTTCAGGTGCCTGAAGTGAATGTCA
TCAGGTGTTTGGAAGAAGTAAGATCAGAAACTTTATTCATTTTCTTCCGTATACGAAGTG
ATGGCTTCTGATGCTTATATTTCAAGATATTTTTTTAAAAGACAACTGTCCCTATTAGAG
CAAAATTTAATTTCAGCGCAGGTCCCAGTAATATGTTTGATTTCTCTGTTATTGCTGGTG
CCTCATGTTGCATCAGATAGAGATTGCCTGCCTCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-456, gnl|bosTau2|chr29 (29032089-29032527)
               

               
               1-456, gnl|Hg17|chr11 (129603682-129603225)
               

               
               1-456, gnl|Mm7|chr9 (30973582-30973993)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-456, gnl|bosTau2|chr29 (29032089-29032527)
               

               
               1-456, gnl|Hg17|chr11 (129603682-129603225)
               

               
               1-456, gnl|Mm7|chr9 (30973582-30973993)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cki (0.165235)
               

               
               ute (0.132784)
               

               
               sug (0.127291)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)
               

               
               ute (0.132784)
               

               
               sug (0.127291)

	1-456, gnl\|bosTau2\|chr29 (29032089-29032527)
	1-456, gnl\|Hg17\|chr11 (129603682-129603225)
	1-456, gnl\|Mm7\|chr9 (30973582-30973993)