Ss1.1-rute2111b_n23.5.5
|
TCGCCATGAAGTCCAGTGGCCTCTTGCCCTTCGTGCTTCTTGCCCTGGGAATCCTGGCAC
CTTGGGCCGTGGAAGGTGCTGAAAATGCTTTGAAAGGGGGAGCCTGCCCTCCTAGAAAAA
TTGTCCAGTGCCTTAGATATGAGAAACCCAAGTGCACAAGTGACTGGCAGTGTCCAGACA
AGAAGAAATGTTGCCGAGATACTTGCGGAATCAAATGCCTGAACCCTGTTGCTATCACGA
ACCCAGTTAAGGTGAAGCCTGGGAAGTGTCCAGTGGTCTATGGCCAGTGTATGATGCTCA
ACCCCCCCAATCACTGCAAGACAGACAGCCAGTGCCTGGGTGACTTAAAATGCTGCAAGA
GCATGTGCGGGAAAGTCTGCCTCACCCCTGTGAAAGCCTGATTCCTGCCATTTAGAAGAG
GCTCTGGATTCCTACTTTGTGCTGTCTGGGAATTCCATTTCCACTCCCAGACGTGGATCC
CTGGGGCAGGCCGTGATAAAGACTTGGTTCTACCACCACCATCTACTTTGCAGAACATCT
CAGCACCCTGTAGGCTTCCAGGACATGCCTGTTGATTGGTGCATCAATAAATAAGCATAT
TTCTCTCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCGCCATGAAGTCCAGTGGCCTCTTGCCCTTCGTGCTTCTTGCCCTGGGAATCCTGGCAC
CTTGGGCCGTGGAAGGTGCTGAAAATGCTTTGAAAGGGGGAGCCTGCCCTCCTAGAAAAA
TTGTCCAGTGCCTTAGATATGAGAAACCCAAGTGCACAAGTGACTGGCAGTGTCCAGACA
AGAAGAAATGTTGCCGAGATACTTGCGGAATCAAATGCCTGAACCCTGTTGCTATCACGA
ACCCAGTTAAGGTGAAGCCTGGGAAGTGTCCAGTGGTCTATGGCCAGTGTATGATGCTCA
ACCCCCCCAATCACTGCAAGACAGACAGCCAGTGCCTGGGTGACTTAAAATGCTGCAAGA
GCATGTGCGGGAAAGTCTGCCTCACCCCTGTGAAAGCCTGATTCCTGCCATTTAGAAGAG
GCTCTGGATTCCTACTTTGTGCTGTCTGGGAATTCCATTTCCACTCCCAGACGTGGATCC
CTGGGGCAGGCCGTGATAAAGACTTGGTTCTACCACCACCATCTACTTTGCAGAACATCT
CAGCACCCTGTAGGCTTCCAGGACATGCCTGTTGATTGGTGCATCAATAAATAAGCATAT
TTCTCTCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
|
83-251, gnl|bosTau2|chr13 (55564225-55564393) |
|
83-251, gnl|canFam2|chr24 (35544188-35544536) |
|
83-251, gnl|dasNov1|scaffold_20597 (6986-7308) |
|
83-251, gnl|hg17|chr20 (43315572-43315920) |
|
83-251, gnl|Hg17|chr20 (43315793-43315625) |
|
83-251, gnl|loxAfr1|scaffold_20093 (6571-6268) |
|
83-251, gnl|mm7|chr2 (164096290-164096615) |
|
83-251, gnl|Mm7|chr2 (164096504-164096336) |
|
83-251, gnl|monDom2|scaffold_1 (156485212-156484941) |
|
83-251, gnl|panTro1|chr21 (45800741-45801089) |
|
83-251, gnl|rheMac2|chr10 (19191226-19190878) |
|
83-251, gnl|rn3|chr3 (155281221-155281552) |
| |
|
395-535, gnl|bosTau2|chr13 (55565594-55565726) |
|
395-535, gnl|Mm7|chr2 (164095205-164095025) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
83-251, gnl|bosTau2|chr13 (55564225-55564393) |
|
83-251, gnl|canFam2|chr24 (35544188-35544536) |
|
83-251, gnl|dasNov1|scaffold_20597 (6986-7308) |
|
83-251, gnl|hg17|chr20 (43315572-43315920) |
|
83-251, gnl|Hg17|chr20 (43315793-43315625) |
|
83-251, gnl|loxAfr1|scaffold_20093 (6571-6268) |
|
83-251, gnl|mm7|chr2 (164096290-164096615) |
|
83-251, gnl|Mm7|chr2 (164096504-164096336) |
|
83-251, gnl|monDom2|scaffold_1 (156485212-156484941) |
|
83-251, gnl|panTro1|chr21 (45800741-45801089) |
|
83-251, gnl|rheMac2|chr10 (19191226-19190878) |
|
83-251, gnl|rn3|chr3 (155281221-155281552) |
| |
|
395-535, gnl|bosTau2|chr13 (55565594-55565726) |
|
395-535, gnl|Mm7|chr2 (164095205-164095025) |
|
ute (170.363) |
|
cut (124.214) |
|
nlu (1.72513) |
|
ova (0.516529) |
|
jej (0.494609) |
|
fat (0.442282) |
|
pty (0.428143) |
|
nmm (0.398406) |
|
cmu (0.372787) |
|
thg (0.253582) |
|
clu (0.239292) |
|
mgp (0.230681) |
|
hea (0.204499) |
|
fcc (0.197785) |
|
eje (0.197668) |
|
nep (0.183925) |
|
duo (0.172801) |
|
nje (0.16592) |
|
cki (0.165235) |
|
cst (0.140036) |
|
ste (0.135208) |
|
pla (0.133672) |
|
eep (0.122564) |
|
cly (0.120642) |
|
eru (0.120048) |
|
ute (170.363) |
|
cut (124.214) |
|
nlu (1.72513) |
|
ova (0.516529) |
|
jej (0.494609) |
|
fat (0.442282) |
|
pty (0.428143) |
|
nmm (0.398406) |
|
cmu (0.372787) |
|
thg (0.253582) |
|
clu (0.239292) |
|
mgp (0.230681) |
|
hea (0.204499) |
|
fcc (0.197785) |
|
eje (0.197668) |
|
nep (0.183925) |
|
duo (0.172801) |
|
nje (0.16592) |
|
cki (0.165235) |
|
cst (0.140036) |
|
ste (0.135208) |
|
pla (0.133672) |
|
eep (0.122564) |
|
cly (0.120642) |
|
eru (0.120048) |
