Non-Coding RNA Search

Ss1.1-rute2112b_p15.5

Sequence:


               
               CACGGTCAAGGAGGAGCAGGAGGTGGCCGAGATGGGGCCGCCCGAAGGTTCAGCTCCCAT
GACCAGCACAGTGATCACCATCCCCAGGGAGACCCCCCACCGGGACCACGTCCTCTGGTC
GCTGTTCAGCACCCTCTTCCTGAACTGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTC
CGTGAGGGCGAGGGACCGGAAGATGGTGGGAGACATCATTGGGGCCCAGAGCTATGCCTC
CACCGCCAAGTGCCTGAACATCTGGGCCCTGGTCCTGGGCCTCCTTCTGACCATTACACT
TATTGCTGTTTTTGCCACTGTTTCAGCGGTGAATTTCAGACTGTATTTTCGGATTTAAGG
CAACAGGGAGGCTACCAGCAGCCATCCACGGCCCAGCCCAAGTCCCCCACCATCCACACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACGGTCAAGGAGGAGCAGGAGGTGGCCGAGATGGGGCCGCCCGAAGGTTCAGCTCCCAT
GACCAGCACAGTGATCACCATCCCCAGGGAGACCCCCCACCGGGACCACGTCCTCTGGTC
GCTGTTCAGCACCCTCTTCCTGAACTGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTC
CGTGAGGGCGAGGGACCGGAAGATGGTGGGAGACATCATTGGGGCCCAGAGCTATGCCTC
CACCGCCAAGTGCCTGAACATCTGGGCCCTGGTCCTGGGCCTCCTTCTGACCATTACACT
TATTGCTGTTTTTGCCACTGTTTCAGCGGTGAATTTCAGACTGTATTTTCGGATTTAAGG
CAACAGGGAGGCTACCAGCAGCCATCCACGGCCCAGCCCAAGTCCCCCACCATCCACACT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q95MQ2_BOVIN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q95MQ2_BOVIN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-378, gnl|bosTau2|chr14 (38478049-38478422)
               

               
               6-378, gnl|Hg17|chr2 (60821963-60821590)
               

               
               6-378, gnl|Mm7|chr11 (3585384-3585034)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-378, gnl|bosTau2|chr14 (38478049-38478422)
               

               
               6-378, gnl|Hg17|chr2 (60821963-60821590)
               

               
               6-378, gnl|Mm7|chr11 (3585384-3585034)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               lnt (0.284616)
               

               
               nmm (0.265604)
               

               
               col (0.195008)
               

               
               ute (0.132784)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.284616)
               

               
               nmm (0.265604)
               

               
               col (0.195008)
               

               
               ute (0.132784)

	6-378, gnl\|bosTau2\|chr14 (38478049-38478422)
	6-378, gnl\|Hg17\|chr2 (60821963-60821590)
	6-378, gnl\|Mm7\|chr11 (3585384-3585034)