Ss1.1-rute2115b_i8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTATTCCTATTCATGAAGCTAATCGGGATGCAAAGAAACTATCCACGATTCATGGTAAAC TTCAAGAAGCATTCAGCAAAATTGTTCATCAGGACGGTAAGCGGATGTTTGGCACCTATT TTCGTGTTGGTTTTTATGGAACCAAGTTCGGGGATTTGGACGAACAGGAATTTGTTTACA AGGAGCCTGCAATAACCAAACTTGCAGAGATATCTCACAGATTGGAGGGATTTTATGGAG AAAGATTTGGCGAGGATGTGGTTGAAGTCATCAAGGATTCTAATCCTGTAGACAAGTGTA AATTAGATCCTAACAAGGCGTATATTCAGATTACCTACGTGGAGCCGTACTTCGACACAT ATGAGATGAAGGACAGAATCACATATTTCGACAAAAATTACAATCTTCGTCGTTTCATGT ACTGTACGCCCTTCACGCTAGACGGCCGCGCCCACGGGGAGCTTCATGAACAATTCAAAC GGAAGACCATTCTGACCACTTCTCATGCCTTTCCCTATATTAAGACCAGAGTCAATGTCA CTCACAAAGAGGAGGTAAGCCTCCAAACAGGGAGATAGGATTCGTGGAGCGGCACCTTGG AGCCCATGTGAGAACAGTGCGCATATAGCGTTGTGTATCCTTCCTGGCATGGTAACGTCC TAGAACTTTACCCATTTTTAAGTCGTTAACTTTCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTATTCCTATTCATGAAGCTAATCGGGATGCAAAGAAACTATCCACGATTCATGGTAAAC TTCAAGAAGCATTCAGCAAAATTGTTCATCAGGACGGTAAGCGGATGTTTGGCACCTATT TTCGTGTTGGTTTTTATGGAACCAAGTTCGGGGATTTGGACGAACAGGAATTTGTTTACA AGGAGCCTGCAATAACCAAACTTGCAGAGATATCTCACAGATTGGAGGGATTTTATGGAG AAAGATTTGGCGAGGATGTGGTTGAAGTCATCAAGGATTCTAATCCTGTAGACAAGTGTA AATTAGATCCTAACAAGGCGTATATTCAGATTACCTACGTGGAGCCGTACTTCGACACAT ATGAGATGAAGGACAGAATCACATATTTCGACAAAAATTACAATCTTCGTCGTTTCATGT ACTGTACGCCCTTCACGCTAGACGGCCGCGCCCACGGGGAGCTTCATGAACAATTCAAAC GGAAGACCATTCTGACCACTTCTCATGCCTTTCCCTATATTAAGACCAGAGTCAATGTCA CTCACAAAGAGGAGGTAAGCCTCCAAACAGGGAGATAGGATTCGTGGAGCGGCACCTTGG AGCCCATGTGAGAACAGTGCGCATATAGCGTTGTGTATCCTTCCTGGCATGGTAACGTCC TAGAACTTTACCCATTTTTAAGTCGTTAACTTTCAG |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 91-228, gnl|bosTau2|chr3 (56762341-56762204) | |
| 91-228, gnl|canFam2|chr5 (50638326-50638136) | |
| 91-228, gnl|danRer3|chr6 (16752238-16752071) | |
| 91-228, gnl|dasNov1|scaffold_112818 (2753-2916) | |
| 91-228, gnl|echTel1|scaffold_323202 (30631-30820) | |
| 91-228, gnl|fr1|chrUn (95761239-95761066) | |
| 91-228, gnl|galGal2|chr8 (27730311-27730506) | |
| 91-228, gnl|hg17|chr1 (62655369-62655560) | |
| 91-228, gnl|Hg17|chr1 (62655528-62655391) | |
| 91-228, gnl|loxAfr1|scaffold_108385 (26196-26387) | |
| 91-228, gnl|mm7|chr4 (98339214-98339403) | |
| 91-228, gnl|Mm7|chr4 (98339372-98339235) | |
| 91-228, gnl|monDom2|scaffold_40 (12277835-12277666) | |
| 91-228, gnl|oryCun1|scaffold_211801 (14349-14158) | |
| 91-228, gnl|panTro1|chr1 (60986340-60986531) | |
| 91-228, gnl|rheMac2|chr1 (65289022-65289213) | |
| 91-228, gnl|rn3|chr5 (119392952-119393135) | |
| 91-228, gnl|tetNig1|chr1 (16033469-16033311) | |
| 91-228, gnl|xenTro1|scaffold_1 (2668875-2668677) | |
| 316-696, gnl|bosTau2|chr3 (56760253-56759885) | |
| 316-696, gnl|Hg17|chr1 (62653637-62653253) | |
| 316-696, gnl|Mm7|chr4 (98337973-98337598) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 91-228, gnl|bosTau2|chr3 (56762341-56762204) | |
| 91-228, gnl|canFam2|chr5 (50638326-50638136) | |
| 91-228, gnl|danRer3|chr6 (16752238-16752071) | |
| 91-228, gnl|dasNov1|scaffold_112818 (2753-2916) | |
| 91-228, gnl|echTel1|scaffold_323202 (30631-30820) | |
| 91-228, gnl|fr1|chrUn (95761239-95761066) | |
| 91-228, gnl|galGal2|chr8 (27730311-27730506) | |
| 91-228, gnl|hg17|chr1 (62655369-62655560) | |
| 91-228, gnl|Hg17|chr1 (62655528-62655391) | |
| 91-228, gnl|loxAfr1|scaffold_108385 (26196-26387) | |
| 91-228, gnl|mm7|chr4 (98339214-98339403) | |
| 91-228, gnl|Mm7|chr4 (98339372-98339235) | |
| 91-228, gnl|monDom2|scaffold_40 (12277835-12277666) | |
| 91-228, gnl|oryCun1|scaffold_211801 (14349-14158) | |
| 91-228, gnl|panTro1|chr1 (60986340-60986531) | |
| 91-228, gnl|rheMac2|chr1 (65289022-65289213) | |
| 91-228, gnl|rn3|chr5 (119392952-119393135) | |
| 91-228, gnl|tetNig1|chr1 (16033469-16033311) | |
| 91-228, gnl|xenTro1|scaffold_1 (2668875-2668677) | |
| 316-696, gnl|bosTau2|chr3 (56760253-56759885) | |
| 316-696, gnl|Hg17|chr1 (62653637-62653253) | |
| 316-696, gnl|Mm7|chr4 (98337973-98337598) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.195008) | |
| ute (0.132784) |