Non-Coding RNA Search

Ss1.1-rute2119b_j10.5

Sequence:


               
               CGCGGCTCGAGCTATTTCCTGAGTACCTGGACCCAGGAAAGAAGCATGAAGTGGCTTGTG
ATATTCGGGCTGGTGGCCTTCTCAGAGTGCTTAGTCACGGTTTTGCCATGGTCTTTGCAA
GATGACACTCATAACAGTGCTTGGAGAACACACAGTGTCATCACAATGGAGGCGTGACAG
ACCCAGGAAAGAAGCATGAAGTGGCTTGTGATATTCGGGCTGGTGGCCTTCTCAGAGTGC
TTAGTCACGATCCCTCTAAGGAAGGTCAAGTCCATCCGAGAAAACCTCAGGGACAAGGGC
TTGCTGAAAAATTTCCTGGAAGAACATCCTCATGACCTGATCCAGAACCGCCTGGCCGAA
GAGTCTGCCCCTCAGAAGAATATCTCTCAACAACCCCTGAGAAACCACTTGGATATGATC
TACGTGGGCAACATCACCATCGGAACACCCCCCCAGCAGTTCAGCATGGCCTTTGACACG
GGCTCATCTGACACATGGGTGCCCTCTATCTACTGCCAAAGCATGGCATGTGTTACACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGGCTCGAGCTATTTCCTGAGTACCTGGACCCAGGAAAGAAGCATGAAGTGGCTTGTG
ATATTCGGGCTGGTGGCCTTCTCAGAGTGCTTAGTCACGGTTTTGCCATGGTCTTTGCAA
GATGACACTCATAACAGTGCTTGGAGAACACACAGTGTCATCACAATGGAGGCGTGACAG
ACCCAGGAAAGAAGCATGAAGTGGCTTGTGATATTCGGGCTGGTGGCCTTCTCAGAGTGC
TTAGTCACGATCCCTCTAAGGAAGGTCAAGTCCATCCGAGAAAACCTCAGGGACAAGGGC
TTGCTGAAAAATTTCCTGGAAGAACATCCTCATGACCTGATCCAGAACCGCCTGGCCGAA
GAGTCTGCCCCTCAGAAGAATATCTCTCAACAACCCCTGAGAAACCACTTGGATATGATC
TACGTGGGCAACATCACCATCGGAACACCCCCCCAGCAGTTCAGCATGGCCTTTGACACG
GGCTCATCTGACACATGGGTGCCCTCTATCTACTGCCAAAGCATGGCATGTGTTACACAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|28189703|dbj|BAC56466.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|28189703|dbj|BAC56466.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               410-518, gnl|bosTau2|chr29 (31206483-31206375)
               

               
               410-518, gnl|Hg17|chr11 (60730556-60730661)
               

               
               410-518, gnl|Mm7|chr19 (10355291-10355183)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               410-518, gnl|bosTau2|chr29 (31206483-31206375)
               

               
               410-518, gnl|Hg17|chr11 (60730556-60730661)
               

               
               410-518, gnl|Mm7|chr19 (10355291-10355183)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ute (0.132784)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)

	410-518, gnl\|bosTau2\|chr29 (31206483-31206375)
	410-518, gnl\|Hg17\|chr11 (60730556-60730661)
	410-518, gnl\|Mm7\|chr19 (10355291-10355183)