Non-Coding RNA Search

Ss1.1-rute2121b_b4.5

Sequence:


               
               TCTGGGTGCTCAAGGCCTGGCTGAACGCTGTGGTCTGGCTCCTGGATGCTGCAGATGACC
TCCATCCTGTACGCCCCACTCTCCGGGCAGCCCTGGAGGGCAGACAGCCCCAGCGACCTT
GCCTTTGTCACCACCTTCTTCTGCTGGCACCTGGGCTTAGGGGCTGTCGTGTTGGCTGCC
ATCTATGGCCTCTGCAGCCTCTGTCACCATCGCCGCTCCTCCTGGGTGGGATTCCCAGCA
GCCAAGTACCAGCCGTGCCCCATAGGAGACCGAAGCGGAGAACTGGAGGAGCTCAGGGCA
GAGGTCGTGCTACAGGACGGAGACGTCTAATCTGAAGACCGTCCCCAGCTATGCTTTGTC
TTGTCCCCATAATGAGCTTTGTGAGGATGCCCACTAGGTGAGTGACACTGCAGTGTCCTG
GGATCCTCAGTGTGTCTTGCTATCTCAGAAGCCGTGTTCCTTGTCCCCAAATAAACCTGC
CAGCAGCTGAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGGGTGCTCAAGGCCTGGCTGAACGCTGTGGTCTGGCTCCTGGATGCTGCAGATGACC
TCCATCCTGTACGCCCCACTCTCCGGGCAGCCCTGGAGGGCAGACAGCCCCAGCGACCTT
GCCTTTGTCACCACCTTCTTCTGCTGGCACCTGGGCTTAGGGGCTGTCGTGTTGGCTGCC
ATCTATGGCCTCTGCAGCCTCTGTCACCATCGCCGCTCCTCCTGGGTGGGATTCCCAGCA
GCCAAGTACCAGCCGTGCCCCATAGGAGACCGAAGCGGAGAACTGGAGGAGCTCAGGGCA
GAGGTCGTGCTACAGGACGGAGACGTCTAATCTGAAGACCGTCCCCAGCTATGCTTTGTC
TTGTCCCCATAATGAGCTTTGTGAGGATGCCCACTAGGTGAGTGACACTGCAGTGTCCTG
GGATCCTCAGTGTGTCTTGCTATCTCAGAAGCCGTGTTCCTTGTCCCCAAATAAACCTGC
CAGCAGCTGAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-329, gnl|bosTau2|chr1 (52024083-52024410)
               

               
               1-329, gnl|Hg17|chr3 (185700301-185699975)
               

               
               1-329, gnl|Mm7|chr16 (20802693-20802369)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-329, gnl|bosTau2|chr1 (52024083-52024410)
               

               
               1-329, gnl|Hg17|chr3 (185700301-185699975)
               

               
               1-329, gnl|Mm7|chr16 (20802693-20802369)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ute (0.929491)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.929491)

	1-329, gnl\|bosTau2\|chr1 (52024083-52024410)
	1-329, gnl\|Hg17\|chr3 (185700301-185699975)
	1-329, gnl\|Mm7\|chr16 (20802693-20802369)