Ss1.1-rute2122b_h15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCAGAGTGTTTGAGCGTGAGGGACTACAGCTGAATCTGTCTTTCGTTCGACCCCCTGGA ACCCCTGCTTTGCTGTTAATCACTGTCACAGCCACCAATACCTCAGCGGGTGATGTCACC CACTTCATCTGCCAGGCCGCTGTGCCCAAGAGTTTCCAACTACAGCTACAGGCCCCTAGT GGGGACACAGTTCCAGCTCAGGGTGGCCTTCCGATGACGCAGCTCCTCAGAATCCTCAAC CCTAACAAGGCCCCCTTGCGGCTGAAGCTGCGCCTCACCTACAACCACTTTGGCCAGTCG GTGCAGGAAATCTTTGAGGTGAACAACTTGCCTGTGGAGACATGGCAGTAACTCTGCCTC CACTCACAGTATGAAGTCTTCCTAAGAACCCAAACCACAGGGGCCCCAGCTACCTGGAGG CACATCTGAGCGCTACCAGCAGGTGGCGCTCTGGTCCTGTGCTTGCCACTGCAGAACCTG TTGGGGGCTCCCCCTCAACCTCACAAATAATAAAGCCTGAGGAGGGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCAGAGTGTTTGAGCGTGAGGGACTACAGCTGAATCTGTCTTTCGTTCGACCCCCTGGA ACCCCTGCTTTGCTGTTAATCACTGTCACAGCCACCAATACCTCAGCGGGTGATGTCACC CACTTCATCTGCCAGGCCGCTGTGCCCAAGAGTTTCCAACTACAGCTACAGGCCCCTAGT GGGGACACAGTTCCAGCTCAGGGTGGCCTTCCGATGACGCAGCTCCTCAGAATCCTCAAC CCTAACAAGGCCCCCTTGCGGCTGAAGCTGCGCCTCACCTACAACCACTTTGGCCAGTCG GTGCAGGAAATCTTTGAGGTGAACAACTTGCCTGTGGAGACATGGCAGTAACTCTGCCTC CACTCACAGTATGAAGTCTTCCTAAGAACCCAAACCACAGGGGCCCCAGCTACCTGGAGG CACATCTGAGCGCTACCAGCAGGTGGCGCTCTGGTCCTGTGCTTGCCACTGCAGAACCTG TTGGGGGCTCCCCCTCAACCTCACAAATAATAAAGCCTGAGGAGGGAA |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 1-155, gnl|bosTau2|chr10 (13620051-13620204) | |
| 1-155, gnl|canFam2|chr8 (6791455-6791576) | |
| 1-155, gnl|danRer3|chrNA (163531184-163531065) | |
| 1-155, gnl|echTel1|scaffold_307867 (13960-14076) | |
| 1-155, gnl|fr1|chrUn (36779196-36779112) | |
| 1-155, gnl|hg17|chr14 (23099288-23099408) | |
| 1-155, gnl|Hg17|chr14 (23099453-23099300) | |
| 1-155, gnl|loxAfr1|scaffold_16557 (33406-33285) | |
| 1-155, gnl|mm7|chr14 (49966134-49966254) | |
| 1-155, gnl|Mm7|chr14 (49966299-49966146) | |
| 1-155, gnl|monDom2|scaffold_12 (26124913-26124797) | |
| 1-155, gnl|oryCun1|scaffold_211309 (47323-47203) | |
| 1-155, gnl|panTro1|chr15 (22069461-22069581) | |
| 1-155, gnl|rheMac2|chr7 (86399459-86399579) | |
| 1-155, gnl|rn3|chr15 (33221820-33221932) | |
| 1-155, gnl|tetNig1|chr5 (5596136-5596025) | |
| 1-155, gnl|xenTro1|scaffold_13 (3099995-3099875) | |
| 248-528, gnl|bosTau2|chr10 (13620612-13620888) | |
| 248-528, gnl|Hg17|chr14 (23098901-23098621) | |
| 248-528, gnl|Mm7|chr14 (49965611-49964634) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-155, gnl|bosTau2|chr10 (13620051-13620204) | |
| 1-155, gnl|canFam2|chr8 (6791455-6791576) | |
| 1-155, gnl|danRer3|chrNA (163531184-163531065) | |
| 1-155, gnl|echTel1|scaffold_307867 (13960-14076) | |
| 1-155, gnl|fr1|chrUn (36779196-36779112) | |
| 1-155, gnl|hg17|chr14 (23099288-23099408) | |
| 1-155, gnl|Hg17|chr14 (23099453-23099300) | |
| 1-155, gnl|loxAfr1|scaffold_16557 (33406-33285) | |
| 1-155, gnl|mm7|chr14 (49966134-49966254) | |
| 1-155, gnl|Mm7|chr14 (49966299-49966146) | |
| 1-155, gnl|monDom2|scaffold_12 (26124913-26124797) | |
| 1-155, gnl|oryCun1|scaffold_211309 (47323-47203) | |
| 1-155, gnl|panTro1|chr15 (22069461-22069581) | |
| 1-155, gnl|rheMac2|chr7 (86399459-86399579) | |
| 1-155, gnl|rn3|chr15 (33221820-33221932) | |
| 1-155, gnl|tetNig1|chr5 (5596136-5596025) | |
| 1-155, gnl|xenTro1|scaffold_13 (3099995-3099875) | |
| 248-528, gnl|bosTau2|chr10 (13620612-13620888) | |
| 248-528, gnl|Hg17|chr14 (23098901-23098621) | |
| 248-528, gnl|Mm7|chr14 (49965611-49964634) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| cov (0.264306) | |
| ton (0.1755) | |
| cli (0.152812) | |
| ute (0.132784) | |
| nbm (0.0993246) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cov (0.264306) | |
| ton (0.1755) | |
| cli (0.152812) | |
| ute (0.132784) | |
| nbm (0.0993246) |